Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_I02
         (466 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061440-1|AAL28988.1|  352|Drosophila melanogaster LD37574p pro...   162   2e-40
AE014296-2093|AAF49961.3|  352|Drosophila melanogaster CG5654-PA...   162   2e-40
U49120-1|AAB94634.1|  359|Drosophila melanogaster Y-box protein ...   155   2e-38
AY118360-1|AAM48389.1|  195|Drosophila melanogaster RE05342p pro...    66   3e-11
AF521096-1|AAM77748.1|  195|Drosophila melanogaster RNA-binding ...    66   3e-11
AE014296-983|AAF50758.2|  195|Drosophila melanogaster CG17334-PA...    66   3e-11
AY060441-1|AAL25480.1|  143|Drosophila melanogaster LD47312p pro...    32   0.33 
AE014296-2798|AAN11740.1|  143|Drosophila melanogaster CG9705-PB...    32   0.33 
AE014296-2797|AAF49414.1|  143|Drosophila melanogaster CG9705-PA...    32   0.33 
AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-P...    30   1.3  

>AY061440-1|AAL28988.1|  352|Drosophila melanogaster LD37574p
           protein.
          Length = 352

 Score =  162 bits (393), Expect = 2e-40
 Identities = 75/93 (80%), Positives = 83/93 (89%)
 Frame = +3

Query: 186 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 365
           VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI RNNP+KAVRSVGDGE VEF V
Sbjct: 57  VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116

Query: 366 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 464
           V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149


>AE014296-2093|AAF49961.3|  352|Drosophila melanogaster CG5654-PA
           protein.
          Length = 352

 Score =  162 bits (393), Expect = 2e-40
 Identities = 75/93 (80%), Positives = 83/93 (89%)
 Frame = +3

Query: 186 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 365
           VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI RNNP+KAVRSVGDGE VEF V
Sbjct: 57  VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116

Query: 366 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 464
           V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149


>U49120-1|AAB94634.1|  359|Drosophila melanogaster Y-box protein
           protein.
          Length = 359

 Score =  155 bits (377), Expect = 2e-38
 Identities = 74/93 (79%), Positives = 82/93 (88%)
 Frame = +3

Query: 186 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 365
           VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI  NNP+KAVRSVGDGE VEF V
Sbjct: 58  VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIA-NNPKKAVRSVGDGEVVEFDV 116

Query: 366 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 464
           V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149


>AY118360-1|AAM48389.1|  195|Drosophila melanogaster RE05342p
           protein.
          Length = 195

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 34/78 (43%), Positives = 44/78 (56%)
 Frame = +3

Query: 207 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 386
           G  KWFNV  G+GF+  ND  ++VFVHQ+ I         RS+G+ E VEF      +G 
Sbjct: 41  GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96

Query: 387 EAARVTGPGGESVKGSPY 440
           EA RV+   G S +GS Y
Sbjct: 97  EATRVSSRHGGSCQGSTY 114


>AF521096-1|AAM77748.1|  195|Drosophila melanogaster RNA-binding
           protein LIN-28 protein.
          Length = 195

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 34/78 (43%), Positives = 44/78 (56%)
 Frame = +3

Query: 207 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 386
           G  KWFNV  G+GF+  ND  ++VFVHQ+ I         RS+G+ E VEF      +G 
Sbjct: 41  GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96

Query: 387 EAARVTGPGGESVKGSPY 440
           EA RV+   G S +GS Y
Sbjct: 97  EATRVSSRHGGSCQGSTY 114


>AE014296-983|AAF50758.2|  195|Drosophila melanogaster CG17334-PA
           protein.
          Length = 195

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 34/78 (43%), Positives = 44/78 (56%)
 Frame = +3

Query: 207 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 386
           G  KWFNV  G+GF+  ND  ++VFVHQ+ I         RS+G+ E VEF      +G 
Sbjct: 41  GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96

Query: 387 EAARVTGPGGESVKGSPY 440
           EA RV+   G S +GS Y
Sbjct: 97  EATRVSSRHGGSCQGSTY 114


>AY060441-1|AAL25480.1|  143|Drosophila melanogaster LD47312p
           protein.
          Length = 143

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 201 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 299
           V+G VK F+   G+GFI  N   EDVF H + I
Sbjct: 55  VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87


>AE014296-2798|AAN11740.1|  143|Drosophila melanogaster CG9705-PB,
           isoform B protein.
          Length = 143

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 201 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 299
           V+G VK F+   G+GFI  N   EDVF H + I
Sbjct: 55  VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87


>AE014296-2797|AAF49414.1|  143|Drosophila melanogaster CG9705-PA,
           isoform A protein.
          Length = 143

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 201 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 299
           V+G VK F+   G+GFI  N   EDVF H + I
Sbjct: 55  VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87


>AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-PA
           protein.
          Length = 1227

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 302 DYRSLMYKHIFFGV-IPIDETISTLDVEPFDSTRNLFS 192
           +YR L Y H F G+ +P D   + + +EP    +NLF+
Sbjct: 599 NYRELYYIHFFSGISLPNDLMYNMMPIEPRRMKKNLFN 636


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,840,339
Number of Sequences: 53049
Number of extensions: 278448
Number of successful extensions: 822
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)