Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_H23
(586 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 145 4e-36
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 108 5e-25
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 102 3e-23
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 91 1e-19
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 86 4e-18
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 64 2e-11
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 63 3e-11
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 55 9e-09
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 36 0.004
SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces ... 29 0.38
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 1.5
SPAC343.01c |erg8||phosphomevalonate kinase |Schizosaccharomyces... 27 2.7
SPBC146.12 |coq6||monooxygenase Coq6|Schizosaccharomyces pombe|c... 27 2.7
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 4.7
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 8.1
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 145 bits (352), Expect = 4e-36
Identities = 74/131 (56%), Positives = 85/131 (64%)
Frame = +3
Query: 192 LLFVAVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPE 371
LLF + +GPKVT V F ++ GDE +G + IGLFGKTVPKT +NF LA +
Sbjct: 8 LLFTLFFGLISANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEK 67
Query: 372 GEGYKGSKFHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAG 551
G GY+GS FHRVI NFMIQ +SIYG RF DENFKL H G LSMANAG
Sbjct: 68 GFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAG 127
Query: 552 KDTNGSQFFIT 584
D+NGSQFFIT
Sbjct: 128 PDSNGSQFFIT 138
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 108 bits (260), Expect = 5e-25
Identities = 55/108 (50%), Positives = 64/108 (59%)
Frame = +3
Query: 261 FHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXX 440
F + + +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 441 XXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFIT 584
+SIYGE+F DENF L+H G LSMANAG +TNGSQFFIT
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFIT 113
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 102 bits (245), Expect = 3e-23
Identities = 56/112 (50%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Frame = +3
Query: 261 FHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG----YKGSKFHRVIDNFMIQ 428
F + I + I LF VPKTV NF L E +G YKGS+FHRVI NFM+Q
Sbjct: 7 FKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQ 66
Query: 429 XXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFIT 584
SIYGE+F DENF+L+H LSMANAG +TNGSQFFIT
Sbjct: 67 GGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFIT 118
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 91.1 bits (216), Expect = 1e-19
Identities = 57/123 (46%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Frame = +3
Query: 246 THKVTF-HMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLA--------QKPEGEGYKGSKF 398
T V F + I +G I I LF VPKT +NF Q QKP G YK S F
Sbjct: 3 TEPVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTF 60
Query: 399 HRVIDNFMIQXXXXXXXXXXXXRSIYGER-FNDENFKLRHYGAGWLSMANAGKDTNGSQF 575
HR+I FMIQ +I+ R F DENF L+H G LSMANAGKD+NG QF
Sbjct: 61 HRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQF 120
Query: 576 FIT 584
FIT
Sbjct: 121 FIT 123
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 85.8 bits (203), Expect = 4e-18
Identities = 51/101 (50%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +3
Query: 285 AVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXX 464
++G I+I L+ + PKT NFY LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 465 RSIYGERFNDE-NFKLRHYGAGWLSMANAGKDTNGSQFFIT 584
SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFIT 105
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 63.7 bits (148), Expect = 2e-11
Identities = 43/98 (43%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +3
Query: 291 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXXRS 470
G I I L P V NF QLA++ Y+ + FHR I FMIQ +S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG-QS 340
Query: 471 IYGERFNDENFK-LRHYGAGWLSMANAGKDTNGSQFFI 581
I+G+ F DE L+H G +SMAN GK+TNGSQFFI
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFI 378
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 63.3 bits (147), Expect = 3e-11
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +3
Query: 291 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXXRS 470
G+I I L+ + PK V NF A E Y + FHR+I NFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ES 519
Query: 471 IYGERFNDE-NFKLRHYGAGWLSMANAGKDTNGSQFFIT 584
I+ + F DE + L+H +SMAN+G +TNGSQFFIT
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFIT 558
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 54.8 bits (126), Expect = 9e-09
Identities = 41/99 (41%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 291 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXXRS 470
G+I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGG-ES 77
Query: 471 IYGERFNDENF-KLRHYGAGWLSMANAGKDTNGSQFFIT 584
IYGE F E +LR G + MA + N SQFFIT
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFIT 116
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 35.9 bits (79), Expect = 0.004
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Frame = +3
Query: 279 DEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXX 458
+ VG++VI LF K PKT +NF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 459 XXRSIY-----GERFNDENF--KLRHYGAGWLSMANA---GKDTN----GSQFFIT 584
R ++ G RF F L H G +SM+ A +D GSQF IT
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIIT 118
>SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 407
Score = 29.5 bits (63), Expect = 0.38
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -1
Query: 340 STVFGTVLPKRPITMFPTASSPIFM*KVTL*VTFGPLGESSD*ATATNKRIPRTVAKAA 164
+TVFG P FP A +P+ + K+ F P GES A AT + IP ++ A+
Sbjct: 92 TTVFGQKYP------FPIALAPVGVQKI-----FNPEGESGSCAAATREHIPYIISTAS 139
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Frame = -3
Query: 383 VALSLWFLCQLIEVVYSLRNSLAEKTN------NNVPYCFITNFHVKSYLMSNFRSFRRI 222
+ ++L F+C ++ + R +++K + + YCF+ VKS L+S RS +
Sbjct: 136 IGVTLTFICPMLSFLLCFRIIISQKAALVSIGISTLYYCFVQFMEVKSALISYDRSLFKF 195
Query: 221 F 219
+
Sbjct: 196 Y 196
>SPAC343.01c |erg8||phosphomevalonate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 299 NVPYCFITNFHVKSYLMSNFRSFRRIFR 216
++ CF+++ + S L S FRS RRI +
Sbjct: 319 SIKNCFLSSESLDSELQSQFRSIRRILQ 346
>SPBC146.12 |coq6||monooxygenase Coq6|Schizosaccharomyces pombe|chr
2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 2.7
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 365 FLCQLIEVVYSLRNSLAEKTNNNV 294
F+ + + + Y+L NS+ +K NNN+
Sbjct: 132 FMSENVNLQYALLNSIIDKMNNNI 155
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 266 VKSYLMSNFRSFRRIFR 216
+KS+L +NFR FRR R
Sbjct: 1045 IKSFLANNFRDFRRQIR 1061
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 338 YSLRNSLAEKTNNNVPYCFITNFHVKSYL 252
+ LRN + TNN+ +I N + K+Y+
Sbjct: 1054 FLLRNDIVPNTNNSAWSEYIRNLYPKAYI 1082
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,276,837
Number of Sequences: 5004
Number of extensions: 42644
Number of successful extensions: 119
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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