Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H21
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060308-1|AAL25347.1|  362|Drosophila melanogaster GH15549p pro...    74   2e-13
AE014298-2930|AAN09515.1|  362|Drosophila melanogaster CG18809-P...    74   2e-13
AE014298-2929|AAG22358.1|  362|Drosophila melanogaster CG18809-P...    74   2e-13

>AY060308-1|AAL25347.1|  362|Drosophila melanogaster GH15549p
           protein.
          Length = 362

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +1

Query: 106 PVLPFIGKRRGGRVLKTGLVKKPKAIDEQLADNTPKDAWSLYMQEVKKYRETSCEEERKT 285
           P  P +G+RRGG+VLKTG+V K K  +E  +D  PKD WSLY+ EV KY+  +C+ +   
Sbjct: 300 PPPPIVGRRRGGKVLKTGVVAKVKTPNE--SDVDPKDFWSLYLAEVNKYKSNACDTDNGK 357

Query: 286 RPLVK 300
           RPLVK
Sbjct: 358 RPLVK 362



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +1

Query: 16  NDGSFLEMFKKMQ 54
           NDGSF+E+FKKMQ
Sbjct: 226 NDGSFMELFKKMQ 238


>AE014298-2930|AAN09515.1|  362|Drosophila melanogaster CG18809-PB,
           isoform B protein.
          Length = 362

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +1

Query: 106 PVLPFIGKRRGGRVLKTGLVKKPKAIDEQLADNTPKDAWSLYMQEVKKYRETSCEEERKT 285
           P  P +G+RRGG+VLKTG+V K K  +E  +D  PKD WSLY+ EV KY+  +C+ +   
Sbjct: 300 PPPPIVGRRRGGKVLKTGVVAKVKTPNE--SDVDPKDFWSLYLAEVNKYKSNACDTDNGK 357

Query: 286 RPLVK 300
           RPLVK
Sbjct: 358 RPLVK 362



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +1

Query: 16  NDGSFLEMFKKMQ 54
           NDGSF+E+FKKMQ
Sbjct: 226 NDGSFMELFKKMQ 238


>AE014298-2929|AAG22358.1|  362|Drosophila melanogaster CG18809-PA,
           isoform A protein.
          Length = 362

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +1

Query: 106 PVLPFIGKRRGGRVLKTGLVKKPKAIDEQLADNTPKDAWSLYMQEVKKYRETSCEEERKT 285
           P  P +G+RRGG+VLKTG+V K K  +E  +D  PKD WSLY+ EV KY+  +C+ +   
Sbjct: 300 PPPPIVGRRRGGKVLKTGVVAKVKTPNE--SDVDPKDFWSLYLAEVNKYKSNACDTDNGK 357

Query: 286 RPLVK 300
           RPLVK
Sbjct: 358 RPLVK 362



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +1

Query: 16  NDGSFLEMFKKMQ 54
           NDGSF+E+FKKMQ
Sbjct: 226 NDGSFMELFKKMQ 238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,233,533
Number of Sequences: 53049
Number of extensions: 428857
Number of successful extensions: 793
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)