Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H20
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    25   0.75 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   2.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.2  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 493 LSFLSLYIVIIVFKTLHYFITIALINLYF 407
           LSF  ++  II F  +HYF        YF
Sbjct: 282 LSFAFIFATIIQFAVVHYFTKYGSGECYF 310


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 460 VFKTLHYFITIALINLYFFF*EIIISK 380
           +FK  H+F  + +  ++ +F E  I K
Sbjct: 1   MFKNYHFFFILVITLIFLYFGEADIKK 27


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -3

Query: 506 FVTFFIILIIIYCNYSF*NPTLFY--NHSIN*FIFLFL 399
           FV   I  I+I+ N S   PT +Y  N +++  +FL L
Sbjct: 48  FVGNIITCIVIWRNPSMQTPTNYYLFNLAVSDLLFLIL 85


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 448 LHYFITIALINLYFFF 401
           L+YFI    +N Y+FF
Sbjct: 220 LNYFIEDIGLNTYYFF 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,179
Number of Sequences: 438
Number of extensions: 3183
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)