Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H10
         (518 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    24   0.82 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.3  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   7.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.6  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 249 RRHFRCWYFTRRDFQE 202
           RR+F C+Y  +R FQ+
Sbjct: 12  RRNFSCYYSLKRHFQD 27


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 118 VSAEIFWISIKYPAAMFD 65
           +  ++FW+S  YP+ M D
Sbjct: 64  MGVDMFWLSPIYPSPMVD 81


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 118 VSAEIFWISIKYPAAMFD 65
           +  ++FW+S  YP+ M D
Sbjct: 64  MGVDMFWLSPIYPSPMVD 81


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 107 FRAYSVDRRTIFRGERES 160
           FR   VDRR  F+G +E+
Sbjct: 57  FRQSWVDRRLAFQGGKET 74


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 220 PPGFSRSFSLVVSPNTKSGATF 155
           PP  S S+S  V+    SGA F
Sbjct: 369 PPTLSESYSSYVNSMYASGAQF 390


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,751
Number of Sequences: 438
Number of extensions: 3895
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)