Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H09
         (520 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    24   0.82 
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               24   1.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   1.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   3.3  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    22   4.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   5.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   5.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   5.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.6  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 131 LRCYIIYLDYFSVENYFISPSVA 199
           LRC   +L    + +YF++P+++
Sbjct: 5   LRCTFFFLSVILITSYFVTPTMS 27


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 131 LRCYIIYLDYFSVENYFISP 190
           LRC  ++L    + +YF++P
Sbjct: 5   LRCIYLFLSVILITSYFVTP 24


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 161 FSVENYFISPSVAPYLLHFLFFSKSR 238
           FS  + F+S  +   +L+F++F  SR
Sbjct: 9   FSASSVFLSLLIPALILYFIYFRISR 34


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 214 MQQIWRNRWRNKVVFH*KVIQV 149
           + Q+W   WRN+     K +QV
Sbjct: 601 LDQVWILNWRNQKDIDVKTVQV 622


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 3   TRLVLEHGRFLSTVRCRESGTFQSSPSDLLVAKRTRLGN 119
           T++++EHG  +  + C++  T  +S   LL      LG+
Sbjct: 87  TKVMVEHGELVMGILCKK--TLGTSAGSLLHICMLELGH 123


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 294 NIYYDAVCLTQIFYI 338
           N+YY  V  T ++Y+
Sbjct: 264 NLYYSPVASTSLYYV 278


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 294 NIYYDAVCLTQIFYI 338
           N+YY  V  T ++Y+
Sbjct: 264 NLYYSPVASTSLYYV 278


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 294 NIYYDAVCLTQIFYI 338
           N+YY  V  T ++Y+
Sbjct: 264 NLYYSPVASTSLYYV 278


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -1

Query: 253 FSTYQSTFGEE*KMQQIWRNRWRNKVVFH*KVIQVNNI 140
           ++ +Q+TF    +    W+N  R+ +  H   ++V N+
Sbjct: 531 YNWFQNTFCYFRRNAATWKNAVRHNLSLHKCFMRVENV 568


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,676
Number of Sequences: 438
Number of extensions: 2716
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)