Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H08
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    26   0.93 
DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.    25   1.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   2.2  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 534 PSRRRTFQNLPGVVAYNPKTVNRWXVKIVISDTICW*RFHS 412
           PS R++F N  G      + V +  V +V++  ICW  FH+
Sbjct: 251 PSPRQSFANSQG-----SRRVLKMLVAVVVAFFICWAPFHA 286


>DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 344 FVIILSLCLFLTMEGTTEKDCSPLWNLHQQIVSDMTILT 460
           FV+++   L+ T EG   + CS      +Q +S  T+++
Sbjct: 17  FVVLILFTLYHTGEGKVYEKCSLARTFDRQKISSRTLIS 55


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -3

Query: 102 AHFHSRK*ILIFIETCICKT--NSKHDLIKSDKPSC 1
           AH H+       ++ CIC    NS++ L+KSD   C
Sbjct: 353 AHLHTEIRKGELVKPCICHRDLNSRNILVKSDLSCC 388


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,359
Number of Sequences: 2352
Number of extensions: 11839
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)