Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H08
         (545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF560715-1|ABQ59025.1|  730|Homo sapiens MTSS1 protein protein.        30   6.1  
AF086645-1|AAF15947.1|  755|Homo sapiens metastasis suppressor p...    30   6.1  

>EF560715-1|ABQ59025.1|  730|Homo sapiens MTSS1 protein protein.
          Length = 730

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 380 MEGTTEKDCSPLWNLHQQIVSDM 448
           ME   EK+CS L  L Q I+SDM
Sbjct: 1   MEAVIEKECSALGGLFQTIISDM 23


>AF086645-1|AAF15947.1|  755|Homo sapiens metastasis suppressor
           protein protein.
          Length = 755

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 380 MEGTTEKDCSPLWNLHQQIVSDM 448
           ME   EK+CS L  L Q I+SDM
Sbjct: 1   MEAVIEKECSALGGLFQTIISDM 23


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,509,898
Number of Sequences: 237096
Number of extensions: 1611264
Number of successful extensions: 2276
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2276
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)