Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H08
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   0.50 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.5  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   2.7  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   2.7  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   2.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   3.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   4.7  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   4.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   4.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   4.7  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   8.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.2  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    21   8.2  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 480 KTVNRWXVKIVISDTICW*RFH 415
           KT+ R    +VI+  ICW  FH
Sbjct: 256 KTITRMLSAVVITFFICWAPFH 277


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 480 KTVNRWXVKIVISDTICW*RFHS 412
           + V R  V +V++  ICW  FH+
Sbjct: 281 RNVIRMLVAVVVAFFICWAPFHA 303


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 355 NNYEITNNNTQLLVFNN 305
           NNY   NNN + L  NN
Sbjct: 87  NNYNYNNNNYKKLYCNN 103


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 355 NNYEITNNNTQLLVFNN 305
           NNY   NNN + L  NN
Sbjct: 87  NNYNYNNNNYKKLYCNN 103


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 355 NNYEITNNNTQLLVFNN 305
           NNY   NNN + L  NN
Sbjct: 87  NNYNYNNNNYKKLYCNN 103


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 244 SLHYMNTENMVTNQY 200
           +L+Y+NTE  V +QY
Sbjct: 272 NLNYVNTEQFVKSQY 286


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 421  SSPADSVRYDDLDGPSVYRLW 483
            S P  S+R DDLD  ++   W
Sbjct: 977  SGPPTSIRVDDLDQHTLKVTW 997


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = -2

Query: 361 TQNNYEITNNNTQLLVFNNCSIFEY*NRFIFILYSNTYISLHYMNTENMVTN 206
           T    E+ +   Q +   N  ++   N+   I+Y N   S H +++  +  N
Sbjct: 181 TTGKGELVSLTVQAMDSTNTMVYMVDNKNTLIIYQNADDSFHRLSSHTLNHN 232


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 244 SLHYMNTENMVTNQY 200
           SL+Y+NTE   T+ Y
Sbjct: 274 SLYYVNTEQFRTSDY 288


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 244 SLHYMNTENMVTNQY 200
           SL+Y+NTE   T+ Y
Sbjct: 274 SLYYVNTEQFRTSDY 288


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 244 SLHYMNTENMVTNQY 200
           SL+Y+NTE   T+ Y
Sbjct: 274 SLYYVNTEQFRTSDY 288


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 525 RRTFQNLPGVVAYNPK 478
           RR F   PG   +NPK
Sbjct: 31  RRPFPTFPGQGPFNPK 46


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 200 FINMYR*HESNYCNTNSQYEIFKSFFN 120
           ++NM    +S Y   N +YE  +  FN
Sbjct: 278 YVNMEPFMKSQYEENNIEYEGIQDIFN 304


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 525 RRTFQNLPGVVAYNPK 478
           RR F   PG   +NPK
Sbjct: 17  RRPFPTFPGQGPFNPK 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,381
Number of Sequences: 438
Number of extensions: 4306
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)