Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_H07
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97010-6|AAL65797.1| 501|Caenorhabditis elegans Hypothetical pr... 81 7e-16
U97010-5|AAK73903.1| 444|Caenorhabditis elegans Hypothetical pr... 81 7e-16
U97010-4|AAL65798.1| 438|Caenorhabditis elegans Hypothetical pr... 81 7e-16
U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium transp... 32 0.23
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z29095-9|CAJ76941.1| 331|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132898-2|CAC14413.1| 349|Caenorhabditis elegans Hypothetical ... 29 2.9
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 29 2.9
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 29 2.9
AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine r... 28 3.8
Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical pr... 28 5.0
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 27 6.6
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 27 6.6
AF101319-4|AAC69352.1| 463|Caenorhabditis elegans Hypothetical ... 27 6.6
U12964-8|AAK93848.1| 231|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL031627-19|CAA20969.1| 349|Caenorhabditis elegans Hypothetical... 27 8.7
>U97010-6|AAL65797.1| 501|Caenorhabditis elegans Hypothetical
protein W08A12.1a protein.
Length = 501
Score = 80.6 bits (190), Expect = 7e-16
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 280 GGVKFADLTPDEAAKFQENLLKTMIQIENTFF-ELGRTSQRNCLIICDRGAMDASAFITK 456
G VKF++L +++ FQ +LL TM QIENTFF + RN LIICDRG MD SA+ +
Sbjct: 149 GRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSP 208
Query: 457 EKWETIMAANNWNNVELCDNRYNHIVHM 540
E W+ ++ N+ +L +RY+ I H+
Sbjct: 209 EDWQRMLKDLNYEEFDLRCSRYDQIAHL 236
Score = 66.9 bits (156), Expect = 9e-12
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +3
Query: 177 QKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWK 278
++ VYK+VLTGGPCGGKTT Q RL+TFFENLGWK
Sbjct: 102 ERKVYKIVLTGGPCGGKTTAQVRLATFFENLGWK 135
>U97010-5|AAK73903.1| 444|Caenorhabditis elegans Hypothetical
protein W08A12.1b protein.
Length = 444
Score = 80.6 bits (190), Expect = 7e-16
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 280 GGVKFADLTPDEAAKFQENLLKTMIQIENTFF-ELGRTSQRNCLIICDRGAMDASAFITK 456
G VKF++L +++ FQ +LL TM QIENTFF + RN LIICDRG MD SA+ +
Sbjct: 92 GRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSP 151
Query: 457 EKWETIMAANNWNNVELCDNRYNHIVHM 540
E W+ ++ N+ +L +RY+ I H+
Sbjct: 152 EDWQRMLKDLNYEEFDLRCSRYDQIAHL 179
Score = 67.7 bits (158), Expect = 5e-12
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3
Query: 168 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWK 278
N+ + VYK+VLTGGPCGGKTT Q RL+TFFENLGWK
Sbjct: 42 NERKFKVYKIVLTGGPCGGKTTAQVRLATFFENLGWK 78
>U97010-4|AAL65798.1| 438|Caenorhabditis elegans Hypothetical
protein W08A12.1c protein.
Length = 438
Score = 80.6 bits (190), Expect = 7e-16
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 280 GGVKFADLTPDEAAKFQENLLKTMIQIENTFF-ELGRTSQRNCLIICDRGAMDASAFITK 456
G VKF++L +++ FQ +LL TM QIENTFF + RN LIICDRG MD SA+ +
Sbjct: 86 GRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSP 145
Query: 457 EKWETIMAANNWNNVELCDNRYNHIVHM 540
E W+ ++ N+ +L +RY+ I H+
Sbjct: 146 EDWQRMLKDLNYEEFDLRCSRYDQIAHL 173
Score = 67.7 bits (158), Expect = 5e-12
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3
Query: 168 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWK 278
N+ + VYK+VLTGGPCGGKTT Q RL+TFFENLGWK
Sbjct: 36 NERKFKVYKIVLTGGPCGGKTTAQVRLATFFENLGWK 72
>U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium
transporter homolog protein4 protein.
Length = 558
Score = 32.3 bits (70), Expect = 0.23
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 207 GGPCGGKTTGQSRLSTFFENLGWKWWCEI 293
G GG T G +++ F LGW+W C +
Sbjct: 357 GNTIGGATNGGDQIAQAFAQLGWQWVCAL 385
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 168 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWKW 281
++N +YKL +GGP G K + R FEN G +W
Sbjct: 1126 SRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN-GNEW 1161
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 168 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWKW 281
++N +YKL +GGP G K + R FEN G +W
Sbjct: 1126 SRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN-GNEW 1161
>Z29095-9|CAJ76941.1| 331|Caenorhabditis elegans Hypothetical
protein R10E11.6b protein.
Length = 331
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 454 KEKWETIMAANNWNNVELCDNRY 522
+ KWET M NVE+ D+RY
Sbjct: 308 RRKWETFMDTTPEQNVEMTDDRY 330
>AL132898-2|CAC14413.1| 349|Caenorhabditis elegans Hypothetical
protein Y59A8B.3 protein.
Length = 349
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/22 (45%), Positives = 20/22 (90%), Gaps = 1/22 (4%)
Frame = -3
Query: 531 DVIISVI-TQFHVIPIVGGHYR 469
D+++SV+ TQ++++P+VGG+ R
Sbjct: 63 DLLLSVLSTQYYLVPVVGGYMR 84
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 168 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWKW 281
++N +YKL +GGP G K + R FEN G +W
Sbjct: 1126 SRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN-GNEW 1161
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 168 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWKW 281
++N +YKL +GGP G K + R FEN G +W
Sbjct: 1126 SRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN-GNEW 1161
>AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine
receptor, class x protein12 protein.
Length = 305
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 524 LYLLSHNSTLFQLLAAIIVSHFSFVINALASMAPLSHMIRQF 399
++LLS + +F LLA I+V + NA ++ SH I F
Sbjct: 15 IFLLSFSGCIFNLLAGIVVLKNPILKNAFGALC-FSHTIANF 55
>Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical
protein T03E6.3 protein.
Length = 342
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 376 ELGRTSQRNCLIIC-DRGAMDASAFITKEKWETIMAANNWNNVELCDNRYNH 528
++GR N L + +R ++ A+ + +E W A NW E+ N N+
Sbjct: 70 QVGRDKHSNTLELSKNRQSLLAARVVFRETWNIHCAVFNWKQFEVTRNEVNN 121
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 429 GSPVAYDKTIPLTGPAKFEECILN 358
G PVAY+KT+ + PA+ +E +LN
Sbjct: 141 GQPVAYEKTVAV-APAQQQEQVLN 163
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 27.5 bits (58), Expect = 6.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 491 GITWNCVITDIITSCIW 541
GITWN + D++ SC++
Sbjct: 451 GITWNLFVPDVLASCMF 467
>AF101319-4|AAC69352.1| 463|Caenorhabditis elegans Hypothetical
protein K08D9.2 protein.
Length = 463
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 129 KLH*ERYKV-CLYYKCXXXXXXXXXXATQASPV 34
K H E+Y V CLYY C TQ +P+
Sbjct: 110 KQHIEKYDVTCLYYDCKRREIANSSFPTQTAPM 142
>U12964-8|AAK93848.1| 231|Caenorhabditis elegans Hypothetical
protein F26F4.12 protein.
Length = 231
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 451 TKEKWETIMAANNWNNVELCDNRYNH 528
T E W +++A+NW N E+ +H
Sbjct: 130 TNEGWTPLLSASNWANFEVVGRLLSH 155
>AL031627-19|CAA20969.1| 349|Caenorhabditis elegans Hypothetical
protein Y102A5C.31 protein.
Length = 349
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/22 (50%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = -3
Query: 531 DVIISVI-TQFHVIPIVGGHYR 469
D+ I+V TQ++++PIVGG+ R
Sbjct: 63 DLFIAVFSTQYYLVPIVGGYMR 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,148,921
Number of Sequences: 27780
Number of extensions: 277283
Number of successful extensions: 805
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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