BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_H06
(464 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2077|AAF58124.1| 431|Drosophila melanogaster CG8192-PA... 29 4.1
BT011427-1|AAR99085.1| 1253|Drosophila melanogaster SD06669p pro... 28 7.1
BT001300-1|AAN71055.1| 1253|Drosophila melanogaster AT12326p pro... 28 7.1
AE014296-1714|AAN11951.1| 1253|Drosophila melanogaster CG16711-P... 28 7.1
AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-P... 28 7.1
AY070805-1|AAL48427.1| 227|Drosophila melanogaster AT19513p pro... 27 9.4
AF145126-2|AAF07879.1| 227|Drosophila melanogaster ferritin 2 l... 27 9.4
AF145124-1|AAF07876.1| 227|Drosophila melanogaster ferritin 2 l... 27 9.4
AE014297-4585|AAN14229.1| 227|Drosophila melanogaster CG1469-PC... 27 9.4
AE014297-4584|AAN14228.1| 227|Drosophila melanogaster CG1469-PB... 27 9.4
AE014297-4583|AAF57038.1| 227|Drosophila melanogaster CG1469-PA... 27 9.4
>AE013599-2077|AAF58124.1| 431|Drosophila melanogaster CG8192-PA
protein.
Length = 431
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 301 KGATLNQLELCCLPTTTLSLGKCNAQYREYHDYSHVAGELQAY---ANLYLKRSYQY 462
+G T +Q+ L C+P + ++ K +++Y +DY + LQ + N+ L+ S +Y
Sbjct: 180 EGFTFHQIHLICMPPSHDNICKQSSKYHIVNDYLYKPINLQEHQSKPNVTLRYSERY 236
>BT011427-1|AAR99085.1| 1253|Drosophila melanogaster SD06669p
protein.
Length = 1253
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -3
Query: 216 RRLCIDGIKFITRTVESAAFTHTGAEGDFQHKEYLLDRDKNLPYCIGTIQTDKYVNKCLY 37
+R C D + TR ++ A GD + D DK+LP + D KCL
Sbjct: 517 KRSCEDNLVQETRPGNGTNPPNSSASGDGLSSFCVPDLDKDLPRILNMDNDD--APKCLS 574
Query: 36 FNRA 25
FN A
Sbjct: 575 FNEA 578
>BT001300-1|AAN71055.1| 1253|Drosophila melanogaster AT12326p
protein.
Length = 1253
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -3
Query: 216 RRLCIDGIKFITRTVESAAFTHTGAEGDFQHKEYLLDRDKNLPYCIGTIQTDKYVNKCLY 37
+R C D + TR ++ A GD + D DK+LP + D KCL
Sbjct: 517 KRSCEDNLVQETRPGNGTNPPNSSASGDGLSSFCVPDLDKDLPRILNMDNDD--APKCLS 574
Query: 36 FNRA 25
FN A
Sbjct: 575 FNEA 578
>AE014296-1714|AAN11951.1| 1253|Drosophila melanogaster CG16711-PB,
isoform B protein.
Length = 1253
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -3
Query: 216 RRLCIDGIKFITRTVESAAFTHTGAEGDFQHKEYLLDRDKNLPYCIGTIQTDKYVNKCLY 37
+R C D + TR ++ A GD + D DK+LP + D KCL
Sbjct: 517 KRSCEDNLVQETRPGNGTNPPNSSASGDGLSSFCVPDLDKDLPRILNMDNDD--APKCLS 574
Query: 36 FNRA 25
FN A
Sbjct: 575 FNEA 578
>AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-PA,
isoform A protein.
Length = 1473
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -3
Query: 216 RRLCIDGIKFITRTVESAAFTHTGAEGDFQHKEYLLDRDKNLPYCIGTIQTDKYVNKCLY 37
+R C D + TR ++ A GD + D DK+LP + D KCL
Sbjct: 517 KRSCEDNLVQETRPGNGTNPPNSSASGDGLSSFCVPDLDKDLPRILNMDNDD--APKCLS 574
Query: 36 FNRA 25
FN A
Sbjct: 575 FNEA 578
>AY070805-1|AAL48427.1| 227|Drosophila melanogaster AT19513p
protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 367 CNAQYREYHDYSHVAGELQAYANLYLKRSYQY 462
CNA++ H+ E+Q+Y N L +SY Y
Sbjct: 44 CNARFA---GIDHIEPEIQSYINANLAKSYDY 72
>AF145126-2|AAF07879.1| 227|Drosophila melanogaster ferritin 2
light chain homolog protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 367 CNAQYREYHDYSHVAGELQAYANLYLKRSYQY 462
CNA++ H+ E+Q+Y N L +SY Y
Sbjct: 44 CNARFA---GIDHIEPEIQSYINANLAKSYDY 72
>AF145124-1|AAF07876.1| 227|Drosophila melanogaster ferritin 2
light chain homolog protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 367 CNAQYREYHDYSHVAGELQAYANLYLKRSYQY 462
CNA++ H+ E+Q+Y N L +SY Y
Sbjct: 44 CNARFA---GIDHIEPEIQSYINANLAKSYDY 72
>AE014297-4585|AAN14229.1| 227|Drosophila melanogaster CG1469-PC,
isoform C protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 367 CNAQYREYHDYSHVAGELQAYANLYLKRSYQY 462
CNA++ H+ E+Q+Y N L +SY Y
Sbjct: 44 CNARFA---GIDHIEPEIQSYINANLAKSYDY 72
>AE014297-4584|AAN14228.1| 227|Drosophila melanogaster CG1469-PB,
isoform B protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 367 CNAQYREYHDYSHVAGELQAYANLYLKRSYQY 462
CNA++ H+ E+Q+Y N L +SY Y
Sbjct: 44 CNARFA---GIDHIEPEIQSYINANLAKSYDY 72
>AE014297-4583|AAF57038.1| 227|Drosophila melanogaster CG1469-PA,
isoform A protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 367 CNAQYREYHDYSHVAGELQAYANLYLKRSYQY 462
CNA++ H+ E+Q+Y N L +SY Y
Sbjct: 44 CNARFA---GIDHIEPEIQSYINANLAKSYDY 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,617,364
Number of Sequences: 53049
Number of extensions: 424415
Number of successful extensions: 1436
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -