Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_H04
         (181 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    23   0.98 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          21   4.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   6.9  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    21   6.9  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    20   9.1  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    20   9.1  

>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 0.98
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 116 RINLFVLFLTIVGL*TGLIAILNYFTKKRGSEP 18
           R+ +FVL   +V L +G+    +Y   K G EP
Sbjct: 3   RLVIFVLLAGLVALGSGIKLPASYSQCKTGDEP 35


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 74  TDRQSSKRGRKD 109
           T R+S+KRG+KD
Sbjct: 526 TRRKSTKRGKKD 537


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 80   RQSSKRGRKDLFVTSRIVMINLRGTGV 160
            RQ  +RG   +F+TS  V + L G  V
Sbjct: 1626 RQLPRRGEILIFITSLRVSVWLEGVVV 1652


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +1

Query: 124 SDRYDKLKRNW 156
           +DR+D ++R+W
Sbjct: 233 NDRFDDIRRHW 243


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 116 RINLFVLFLTIVGL*TGLIAIL 51
           R+N F+  L I  L  GL+ +L
Sbjct: 260 RMNFFIKQLAIADLCVGLLNVL 281


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 8   GHRVVHCRVS**NNLKW 58
           GH   HCR    +NL W
Sbjct: 284 GHTSYHCREPDRSNLCW 300


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,601
Number of Sequences: 2352
Number of extensions: 2498
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used:  9966663
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)