Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_G23
(573 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 136 2e-33
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 126 3e-30
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 94 2e-20
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 87 2e-18
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 82 5e-17
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 33 0.030
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 27 2.0
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 25 6.0
SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G family|Schizosaccha... 25 7.9
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 25 7.9
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 136 bits (330), Expect = 2e-33
Identities = 69/169 (40%), Positives = 94/169 (55%)
Frame = +2
Query: 65 KVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRY 244
K I+ LFINN+ VD+V +P E +I +VA+ F
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 245 SEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAG 424
+ WR ++QRG L +LA +E++ +YLA +ETLDNGK + A +V A+ RYY G
Sbjct: 77 APWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGG 136
Query: 425 KADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
ADK G TI D + +T EP+GVCGQI+PWN+P M WKIAPA+
Sbjct: 137 WADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAV 185
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 126 bits (303), Expect = 3e-30
Identities = 76/183 (41%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Frame = +2
Query: 32 LFTRVNFI--KMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXX 205
LF +NF K VK I L+IN EW S +T+ T++P E VI +V
Sbjct: 5 LFVSINFPNGKSVKQPIG---LYINGEWHK--SAETWETVDPSIEEVIAKVYLAGEKEID 59
Query: 206 XXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKP-VKQAEQ 382
F W+ + S++G LL KLA L E+ A LA +E +D+GKP V A
Sbjct: 60 YAVKSAKEAF---KTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARG 116
Query: 383 EVLWASGIVRYYAGKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIA 562
+V ++RY AG ADKI G IP E L + + P+GVCGQI+PWNYP+ M WKIA
Sbjct: 117 DVDGTIALLRYCAGWADKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIA 176
Query: 563 PAL 571
PAL
Sbjct: 177 PAL 179
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 93.9 bits (223), Expect = 2e-20
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Frame = +2
Query: 71 DIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSE 250
D + + F+ +W+ + + KTF NP +I +VA+ F Y
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTYKN 73
Query: 251 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKA 430
+ + SQ LL + A L+ + L ++ TL+NGKP+ QAE EV SG +++YA +A
Sbjct: 74 FTHVQRSQ---LLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEA 130
Query: 431 DKILGNTIPADGEVLTF--TLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
+ G+ P+ + F ++K+PVGV I PWN+P M K AL
Sbjct: 131 VRTFGDVAPSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAAL 179
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 87.0 bits (206), Expect = 2e-18
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Frame = +2
Query: 26 ARLFTRVNFIKMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXX 205
++L T + + + ++ + +I +WV A S KTF NP + V +
Sbjct: 5 SKLSTNIKDLSLFDLEEFPARSYIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETR 64
Query: 206 XXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQE 385
F Y R D +R +L + L+ +A LA + TL+NGK + A+ E
Sbjct: 65 KAIKVAHEAFLSY---RNSDIKERYAILRRWYDLIMENADDLATMMTLENGKALGDAKGE 121
Query: 386 VLWASGIVRYYAGKADKILG-NTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIA 562
V++A+ + ++AG+A +I G +++ ++ + T+K+PVGV G I PWN+P M K+
Sbjct: 122 VVYAAKFIDWFAGEALRISGDSSMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVG 181
Query: 563 PAL 571
AL
Sbjct: 182 AAL 184
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 82.2 bits (194), Expect = 5e-17
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Frame = +2
Query: 89 LFINNEWVDAV--SKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLL 262
LFI+ ++V + + K P INP E +I A F R W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Query: 263 DASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADK-- 436
QRGL+L K+A +M + LA ++T++ GKP A ++ + + YYA A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDN 141
Query: 437 -ILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
+ +P + F + P GV G I PWN+P+ M +WK+ PA+
Sbjct: 142 PTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAI 187
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 33.1 bits (72), Expect = 0.030
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 248 EWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKP-VKQAEQEVLWASGIVRYYAG 424
EW+ ++R L L + R+ AE+ D GK V A E+L + +
Sbjct: 40 EWKSTSFAERRNFLKALKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLA 99
Query: 425 KADKILGNTIPADGEVLT-----FTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
++ L T +LT + EP+GV ++ WNYP+ + I AL
Sbjct: 100 NGEQSLRPT-KRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISAL 152
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 2.0
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 281 LLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGNTIPA 460
L+ KL + KY ++ D G P+ + + E L SG+ + +K+L +
Sbjct: 531 LIKEKLTVNVPVKPKYSSQETAFDTGAPISEEQIEELLNSGLDEQ---EGEKLLVLHVSE 587
Query: 461 DGEVLTFT--LKEPVGV 505
V TFT LK P G+
Sbjct: 588 KDPVGTFTEVLKNPFGL 604
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 365 VKQAEQEVLWASGIVRYYAGKADKILG 445
VK+ + +W G + YAG+ +ILG
Sbjct: 219 VKKGDTVAIWGMGPIGLYAGRWAQILG 245
>SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 496
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 269 SQRGLLLFKLATLMERDAKYLAE--LETLDNGKPVK 370
SQ G LLF L +L ERD + A+ E L+N V+
Sbjct: 143 SQIGKLLFDLRSLNERDNPFHAQNNAENLENATFVR 178
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 7.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 376 CLLHWFSVVQCFEF 335
CL+HWF +++ EF
Sbjct: 337 CLVHWFQIMRSAEF 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,338,483
Number of Sequences: 5004
Number of extensions: 44402
Number of successful extensions: 107
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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