Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_G23
(573 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 145 3e-35
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 144 3e-35
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 142 1e-34
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 126 1e-29
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 109 2e-24
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 90 1e-18
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 83 2e-16
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 65 4e-11
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 61 5e-10
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 50 2e-06
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 43 2e-04
01_05_0543 + 23093519-23093624,23093912-23093934 36 0.030
07_03_0806 + 21654057-21655154,21655728-21655796,21656110-216562... 29 2.0
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 28 4.6
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 145 bits (351), Expect = 3e-35
Identities = 73/169 (43%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
Frame = +2
Query: 68 VDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYS 247
V + YT+L I+ ++VD+ S KTFPT++P+ +I VAEG F
Sbjct: 64 VQVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDE-G 122
Query: 248 EWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAG 424
W + A +R +L + A L+E+ +A LET DNGKP QA EV + ++RYYAG
Sbjct: 123 PWPKMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYAG 182
Query: 425 KADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
ADKI G +PADG L EP+GV GQI+PWN+P+ MF WK+ PAL
Sbjct: 183 WADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 231
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 144 bits (350), Expect = 3e-35
Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +2
Query: 68 VDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYS 247
VD+KYTKL IN +VDA S KTF T++P+ VI +VAEG F
Sbjct: 68 VDVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDE-G 126
Query: 248 EWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAE-QEVLWASGIVRYYAG 424
W + A +R +L + A L+E+ A +A LET D GK ++Q EV + +RYY G
Sbjct: 127 PWPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGG 186
Query: 425 KADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
ADKI G +PADG L EP+GV GQI+PWN+P+ MF WK+ PAL
Sbjct: 187 WADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 235
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 142 bits (345), Expect = 1e-34
Identities = 75/168 (44%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Frame = +2
Query: 71 DIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSE 250
+I+YTKLFIN +VDA S KTF T +P+ VI +VAEG F + E
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFD-HGE 100
Query: 251 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGK 427
W + S+RG ++ K A ++ER A LA LE+LD GKP+ A +V GI+RY+AG
Sbjct: 101 WPRMSGSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGA 160
Query: 428 ADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
ADKI G T+ ++ +TL+EP+GV G I+PWN+P MF K++PAL
Sbjct: 161 ADKIHGETLKMSRQLQGYTLREPLGVAGLIVPWNFPAIMFFSKVSPAL 208
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 126 bits (304), Expect = 1e-29
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Frame = +2
Query: 59 MVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFH 238
+V +IK+TKLFIN E+VDA S KTF T +P+ V+ +AE F
Sbjct: 19 LVVPEIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFE 78
Query: 239 RYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRY 415
+ +W + +R ++ KLA L+E+ A LA L+ D GK + + ++ A+ ++RY
Sbjct: 79 -HGKWPRMSGYERSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRY 137
Query: 416 YAGKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
YAG ADKI G ++ G+ +TL+EP+GV G I+PWN+P MF K++PAL
Sbjct: 138 YAGAADKIHGESLRVAGKYQGYTLREPIGVVGVIIPWNFPTMMFFLKVSPAL 189
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 109 bits (261), Expect = 2e-24
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Frame = +2
Query: 47 NFIKMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXX 226
NF V V K K+ ++ + D + K TF T +P+ VI ++AEG
Sbjct: 9 NFQLQVFVSWKQLKV-VDQRFRDLMGK-TFETRDPRTGEVIAKIAEGDKADIDLAVKAAR 66
Query: 227 XXFHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASG 403
F + W + RG +L K A L+E+ + LA L+T+D GK + ++ +
Sbjct: 67 EAFD-HGPWPRMSGFARGRILHKFADLVEQHVEELAALDTVDAGKLFAMGKLVDIPGGAN 125
Query: 404 IVRYYAGKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
++RYYAG ADK+ G T+ +TLKEPVGV G I+PWNYP MF +K +PAL
Sbjct: 126 LLRYYAGAADKVHGETLKMARPCHGYTLKEPVGVVGHIVPWNYPTTMFFFKASPAL 181
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 90.2 bits (214), Expect = 1e-18
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Frame = +2
Query: 89 LFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYS--EWRLL 262
LFI W + + P +NP E+ I + F R W
Sbjct: 12 LFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSRA 71
Query: 263 DASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKIL 442
+ R L +A ++ YLA LETLD+GKP+ +A ++ + YYA A+ +
Sbjct: 72 PGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAEALD 131
Query: 443 GN-----TIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
G ++P + ++ LKEP+GV G I PWNYP+ M WK+APAL
Sbjct: 132 GKQRAPISLPMEN-FESYVLKEPIGVVGLITPWNYPLLMATWKVAPAL 178
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +2
Query: 242 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYA 421
+ W L A++R L K L+ + LA L TL+ GKP+K+A EV + + + Y+A
Sbjct: 132 FYSWSKLTANERSKALRKWHDLIISHKEELALLMTLEQGKPMKEALVEVTYGASFIEYFA 191
Query: 422 GKADKILGNTIPAD-GEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
+A +I G+ IP + LK+PVGV G + PWN+P+ M K+ PAL
Sbjct: 192 EEAKRIYGDIIPPTLSDRRLLVLKQPVGVVGAVTPWNFPLAMITRKVGPAL 242
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 64.9 bits (151), Expect = 4e-11
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 28/194 (14%)
Frame = +2
Query: 74 IKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXF--HRYS 247
I +LF+ EW + P +NP ES I ++ G +R
Sbjct: 5 IPQRQLFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGR 64
Query: 248 EWRLLDASQRGLLLFKLAT-LMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAG 424
+W + R L +A ++ER ++ LA LETLD GKP+ +A ++ +G Y+A
Sbjct: 65 DWARAPGAVRAKYLRAIAAKIIERKSE-LARLETLDCGKPLDEAAWDMDDVAGCFEYFAD 123
Query: 425 KADKI-LGNTIPADGEVLTFTL---KEPVGVCGQILPW---------------------N 529
A+ + P + F KEP+GV G I PW N
Sbjct: 124 LAESLDKRQNAPVSLPMENFKCYLRKEPIGVVGLITPWYFTFFSHPALIFIYDPSMALMN 183
Query: 530 YPIPMFIWKIAPAL 571
YP+ M WK+APAL
Sbjct: 184 YPLLMATWKVAPAL 197
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 61.3 bits (142), Expect = 5e-10
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Frame = +2
Query: 86 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLD 265
+L I E+V++ + + NP + V+ ++ F WR
Sbjct: 25 RLLIGGEFVESRADEHVDVTNPATQEVVSRIPLTTADEFRAAVDAARTAF---PGWRNTP 81
Query: 266 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 445
+ R ++ K L+ + LAE T + GK +K A +V +V + G +G
Sbjct: 82 VTTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAWGDVFRGLEVVEHACGMGTLQMG 141
Query: 446 NTIP-ADGEVLTFTLKEPVGVCGQILPWNYP--IPMFIWKIA 562
+ + TF+++EP+GVC I P+N+P IP++++ IA
Sbjct: 142 EYVSNVSNGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPIA 183
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Frame = +2
Query: 251 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKA 430
W +R LL K A +++ +AE + KP K A EV+ + +V Y A +
Sbjct: 72 WARTPLWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRSGDLVSYTAEEG 131
Query: 431 DKILG-------NTIPA-DGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
+ILG ++ P + + K P+GV I P+NYP+ + + KI PAL
Sbjct: 132 VRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPAL 186
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +2
Query: 251 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKA 430
W + A +RG ++ ++ + +L L +L+ GK + + EV + Y G +
Sbjct: 98 WMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIIDMCDYAVGLS 157
Query: 431 DKILGNTIPADG-EVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPAL 571
++ G+ IP++ + + P+GV G I +N+P + W AL
Sbjct: 158 RQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIAL 205
>01_05_0543 + 23093519-23093624,23093912-23093934
Length = 42
Score = 35.5 bits (78), Expect = 0.030
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 65 KVDIKYTKLFINNEWVDAVSKKT 133
K++IK+TKLFIN +VDAVS +T
Sbjct: 16 KLEIKFTKLFINGRFVDAVSDET 38
>07_03_0806 +
21654057-21655154,21655728-21655796,21656110-21656274,
21656416-21656589,21659506-21659769,21659957-21660070
Length = 627
Score = 29.5 bits (63), Expect = 2.0
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 285 CSSNWPPSWRETQNI 329
CS +WPP+WR+ ++I
Sbjct: 511 CSCDWPPNWRDNKDI 525
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Frame = +2
Query: 251 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGK 427
W QR L L + + E+ + D GK + A E++ + + +
Sbjct: 140 WAKSSFKQRRQFLRILLKYILEHQDLICEISSRDTGKTMVDASLGEIMTTCEKITWLLDE 199
Query: 428 ADKILGNTIPADGEVLTFTLKE----PVGVCGQILPWNYP 535
+K L + G + + P+GV G I+ WNYP
Sbjct: 200 GEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWNYP 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,587,223
Number of Sequences: 37544
Number of extensions: 305151
Number of successful extensions: 784
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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