Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_G20
         (496 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    42   6e-04
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    42   6e-04
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    42   6e-04
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    32   0.49 
AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p pro...    28   8.0  
AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA...    28   8.0  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
 Frame = +3

Query: 21   VKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVLL 179
            +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K + +
Sbjct: 3135 IKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI-I 3192

Query: 180  TVSEPCIDXXXXXXXXXXXXXKALLENLGMSMSIVTVTPELKCGGNLAH-VVGFDESSVL 356
             V    ++              ++ +  G  + ++     L   G L+  ++GF+   V 
Sbjct: 3193 GVRSDSLEYKNWWKFVRAQLTGSITKFDGALIHLIAPVKGLSLEGVLSEKLIGFNSRLVA 3252

Query: 357  MLGDKKRTKESEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKL 491
             +  K   K     R  L+  +D  IDFV    G VF++ N+ KL
Sbjct: 3253 TVDGKDSKK-----RTKLQFDNDMGIDFVLNNGGWVFATQNFEKL 3292


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
 Frame = +3

Query: 21   VKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVLL 179
            +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K + +
Sbjct: 858  IKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI-I 915

Query: 180  TVSEPCIDXXXXXXXXXXXXXKALLENLGMSMSIVTVTPELKCGGNLAH-VVGFDESSVL 356
             V    ++              ++ +  G  + ++     L   G L+  ++GF+   V 
Sbjct: 916  GVRSDSLEYKNWWKFVRAQLTGSITKFDGALIHLIAPVKGLSLEGVLSEKLIGFNSRLVA 975

Query: 357  MLGDKKRTKESEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKL 491
             +  K   K     R  L+  +D  IDFV    G VF++ N+ KL
Sbjct: 976  TVDGKDSKK-----RTKLQFDNDMGIDFVLNNGGWVFATQNFEKL 1015


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
 Frame = +3

Query: 21   VKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVLL 179
            +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K + +
Sbjct: 3135 IKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI-I 3192

Query: 180  TVSEPCIDXXXXXXXXXXXXXKALLENLGMSMSIVTVTPELKCGGNLAH-VVGFDESSVL 356
             V    ++              ++ +  G  + ++     L   G L+  ++GF+   V 
Sbjct: 3193 GVRSDSLEYKNWWKFVRAQLTGSITKFDGALIHLIAPVKGLSLEGVLSEKLIGFNSRLVA 3252

Query: 357  MLGDKKRTKESEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKL 491
             +  K   K     R  L+  +D  IDFV    G VF++ N+ KL
Sbjct: 3253 TVDGKDSKK-----RTKLQFDNDMGIDFVLNNGGWVFATQNFEKL 3292


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
            protein.
          Length = 4129

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = -1

Query: 166  LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGIRL 5
            +TA    GR+  DF+L  +++KP+FI+    +SI  +     VS  VL  G+ L
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGVPL 2052


>AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p
           protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 472 DENTRPSTV*TKSMQESDGSSNVALSASDSLVLFLSPSIRTDDSSNP 332
           DE+++     T S  ESD SS+V + A  + V    P+ +T+ S+ P
Sbjct: 274 DEDSKDDRSPTSSGNESDDSSDVEMPAEAAEVATKLPASKTEVSAPP 320


>AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA
           protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 472 DENTRPSTV*TKSMQESDGSSNVALSASDSLVLFLSPSIRTDDSSNP 332
           DE+++     T S  ESD SS+V + A  + V    P+ +T+ S+ P
Sbjct: 274 DEDSKDDRSPTSSGNESDDSSDVEMPAEAAEVATKLPASKTEVSAPP 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,558,557
Number of Sequences: 53049
Number of extensions: 375302
Number of successful extensions: 1025
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)