Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_G19
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   3.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.6  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 117 WDLIIYFKITCLLFS*YLVR 58
           W LI+YF I C   + Y +R
Sbjct: 6   WWLILYFSIVCQAKAHYSLR 25


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 16  PRGRRSKRIPRAENSDEVSRKQQ 84
           PR  R K +PR + S++  R ++
Sbjct: 69  PRSHRFKSLPRCQLSNKRDRSRE 91


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 374 YDRLFPYHNHLDPHNNRS 321
           YD L  + N +D H+NR+
Sbjct: 265 YDVLRSWRNLMDEHSNRT 282


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,968
Number of Sequences: 438
Number of extensions: 2291
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)