Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_G17
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    27   0.11 
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    25   0.45 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.1  
M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    22   3.2  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   3.2  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    22   4.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   4.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.4  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   9.8  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = +3

Query: 39  VGLFSGSFIVLFITVVLSALFH---DGGTENFKTAFRLYRGPFLLVEFIFLIGINVYGWR 209
           VG+FS   I++    +L A+     DGG  NF T        F+    +F I ++     
Sbjct: 86  VGVFSSPTILISYIYILMAILRMSADGGCRNFSTCSSHPTAAFISYGTLFFIYVHPSATF 145

Query: 210 SSGVNHVL 233
           S  +N V+
Sbjct: 146 SLDLNKVV 153


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 39  VGLFSGSFIVLFITVVLSALFH---DGGTENFKTAFRLYRGPFLLVEFIFLIGINVYGWR 209
           VG+FS   I++    +L A+     DGG  NF T        F+    +F I +      
Sbjct: 85  VGVFSVLTILISYIYILMAILRMSADGGCRNFSTCSSHPTAAFISYGTLFFIYVQPSATF 144

Query: 210 SSGVNHVL 233
           S  +N V+
Sbjct: 145 SLDLNKVV 152


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 29  HVQSWTVLRIVYSVIHHGCVVCLIP 103
           + QSW  L  ++ +  HGC V  IP
Sbjct: 84  NAQSWQRLTSLHELHVHGCKVLRIP 108


>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 473 NTTTYPKKPESRFMTEHLERIKEE 402
           N +   K+P + F  E L R+K E
Sbjct: 15  NGSPEEKRPRTAFSAEQLARLKRE 38


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 223 LTPDDRQPYTFMPIKNINST 164
           + P  + PY F+P+  +++T
Sbjct: 820 MQPPQQNPYMFLPVSYMSTT 839


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 494 RHERRR*NTTTYPKKPESRFMTEHLERIKEE 402
           R + R    T   K+P + F  E L R+K E
Sbjct: 8   RSDGRGNGGTPEEKRPRTAFSGEQLARLKRE 38


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 157 NGPLYNLKAVLKFSVPP 107
           NG  Y+LK  LK  +PP
Sbjct: 426 NGDQYDLKKNLKVCLPP 442


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 246 DPRNHLSEQDLMELAAIFGVVWALS 320
           DP N+  ++ L  + A    VW LS
Sbjct: 140 DPINYAQKRTLKRVLATIAGVWILS 164


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 246 DPRNHLSEQDLMELAAIFGVVWALS 320
           DP N+  ++ L  + A    VW LS
Sbjct: 140 DPINYAQKRTLKRVLATIAGVWILS 164


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 246 DPRNHLSEQDLMELAAIFGVVWALS 320
           DP N+  ++ L  + A    VW LS
Sbjct: 140 DPINYAQKRTLKRVLATIAGVWILS 164


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 60  FIVLFITVVLSALFHDGGTENFKTAFRLYR 149
           +IVL ITV+ + +F  G   N  T   + R
Sbjct: 51  YIVLPITVIYAVIFVTGLVGNVSTCVVIAR 80


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 118 SVPPSWNKADNTTVMNNTINDPENSPTLN 32
           S+P S    ++ TV  + IND +   T N
Sbjct: 858 SLPASSTSINSITVEKDVINDVKTQITTN 886


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 315 LSILSFIYSASLSIPP 362
           L+   +IY+ SLS+PP
Sbjct: 18  LASFVWIYALSLSLPP 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,256
Number of Sequences: 438
Number of extensions: 3614
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)