Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_G14
(563 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 73 3e-14
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 56 3e-09
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 55 6e-09
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 1e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 52 4e-08
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 50 2e-07
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 48 7e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 46 4e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 44 2e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 6e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 6e-05
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 38 8e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 33 0.038
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 33 0.038
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 30 0.20
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 30 0.27
SPAC23A1.02c |||phosphoprotein phosphatase |Schizosaccharomyces ... 29 0.62
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 27 1.4
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 27 1.9
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 27 2.5
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 26 4.4
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 26 4.4
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 25 5.8
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 5.8
SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr 2|||M... 25 7.7
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 72.9 bits (171), Expect = 3e-14
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Frame = +3
Query: 9 RTHTDERPYSCDI--CGKAFRRQDHLRDHRYIHSKEKPFKC--TECGKGFCQSRTLAVHK 176
RTH++ERP+ CD C KAF R+ HL+ H+ H+ KPF C C F + L H
Sbjct: 45 RTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHI 104
Query: 177 ILHMEESPHKC--PVCSRSFNQRSNLKTHL-LTHTDHKPYEC--NSCGKVFRRNCDLRRH 341
+H + P+ C C F++ L++H+ HT PY C C F L+ H
Sbjct: 105 EVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNH 164
Score = 70.1 bits (164), Expect = 2e-13
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +3
Query: 48 CGKAFRRQDHLRDHRYIHSKEKPFKC--TECGKGFCQSRTLAVHKILHMEESPHKCPV-- 215
CGK + R L H HS E+PF C T C K F + L +HK H P C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 216 CSRSFNQRSNLKTHLLTHTDHKPYEC--NSCGKVFRRNCDLRRH 341
C F + +L+ H+ H KPY C C + F ++ LR H
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSH 133
Score = 54.8 bits (126), Expect = 8e-09
Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Frame = +3
Query: 36 SCDICGKAFRRQDHLRDHRYIH----SKEKPFKC--TECGKGFCQSRTLAVH-KILHMEE 194
SC ICG+ F+ HLR H +H + K + C C K F +S L H ++H
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 195 SPHKCPVCSRSFNQRSNLKTHLLTHT---DHKPYECNSCG 305
C C F + L+ HL T HKPY N CG
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY-INECG 303
Score = 54.0 bits (124), Expect = 1e-08
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +3
Query: 6 RRTHTDERPYSC--DICGKAFRRQDHLRDHRYIHSKEKPFKCT--ECGKGFCQSRTLAVH 173
+R HT+ +P+SC D C F Q HL H +H K KP+ CT C + F + + L H
Sbjct: 74 KRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSH 133
Query: 174 -KILHMEESPHKCPV--CSRSFNQRSNLKTHL-LTHTDHKPYEC 293
H P+ C C F + L+ H+ H Y C
Sbjct: 134 ISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSC 177
Score = 53.6 bits (123), Expect = 2e-08
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Frame = +3
Query: 9 RTHTDERPYSC--DIC--GKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHK 176
R H YSC + C + F + L++H I P C+ CG+ F + L H
Sbjct: 167 RAHEKIISYSCPHESCVGHEGFEKWSQLQNH--IREAHVP-SCSICGRQFKTAAHLRHHV 223
Query: 177 ILHM----EESPHKCPV--CSRSFNQRSNLKTHL-LTHTDHKPYECNSCGKVFRRNCDLR 335
+LH E + CP+ C +SF + S LK H+ + H + + C+SCG F L+
Sbjct: 224 VLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQ 283
Query: 336 RH 341
RH
Sbjct: 284 RH 285
Score = 50.4 bits (115), Expect = 2e-07
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Frame = +3
Query: 15 HTDERPYSC--DICGKAFRRQDHLRDH-RYIHSKEKPFKCT--ECGKGFCQSRTLA---- 167
H +PY+C + C + F + LR H H+ P+ CT +C F + L
Sbjct: 107 HRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVN 166
Query: 168 -VHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRHA 344
H+ + PH+ V F + S L+ H+ H P C+ CG+ F+ LR H
Sbjct: 167 RAHEKIISYSCPHESCVGHEGFEKWSQLQNHI--REAHVP-SCSICGRQFKTAAHLRHHV 223
Query: 345 LTH 353
+ H
Sbjct: 224 VLH 226
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 276 HKPYECNSCGKVFRRNCDLRRHALTHA 356
H PYE CGK + R L +H TH+
Sbjct: 24 HCPYE--ECGKKYSRPSLLEQHLRTHS 48
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 56.4 bits (130), Expect = 3e-09
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 27 RPYSCDICGKAFRRQDHLRDH-RYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESP 200
+ + C C K F+R +HLR H R +H+ EKPF C CGK F + L H+ LH+ SP
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASP 478
Score = 54.0 bits (124), Expect = 1e-08
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +3
Query: 207 CPVCSRSFNQRSNLKTHLLT-HTDHKPYECNSCGKVFRRNCDLRRHALTHAXXX-XXXXX 380
CP CS+ F + +L+ H+ + HT KP+ C CGK F R +LR+H H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLACF 483
Query: 381 XXXXXEEDIGRPGSPIEPGYDDEDPEISSPEHSPVRRAR-SSSIESIGREQSEERP 545
G PG+P++P + P I P+ + SS IE+ S +RP
Sbjct: 484 FQPSGYYSSGAPGAPVQP----QKP-IEDLNKIPINQGMDSSQIENTNLMLSSQRP 534
Score = 47.2 bits (107), Expect = 2e-06
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 111 KPFKCTECGKGFCQSRTLAVH-KILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKP 284
K F C EC K F +S L H + LH E P C +C + F++R NL+ H H + P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 6 RRTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKP 116
R HT E+P+ C ICGK F R+D+LR H +H P
Sbjct: 443 RSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 31.9 bits (69), Expect = 0.067
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 222 RSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRH 341
R Q SN KT + K + C C K F+R+ LRRH
Sbjct: 402 RKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRH 441
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 55.2 bits (127), Expect = 6e-09
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +3
Query: 198 PHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECN--SCGKVFRRNCDLRRHALTHAXXXXX 371
P+KCP+C+++F + + H+ THT KP+ C C K F R+ +L RHA H
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
Query: 372 XXXXXXXXEEDIGR----PGSPIEPGYDDEDPEISSPEHSP 482
+ R P +EP ++ +++ +P
Sbjct: 85 RNAAAAAAANNSARSSNSPAGNLEPSTNNAGVHMTNASMNP 125
Score = 50.0 bits (114), Expect = 2e-07
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 27 RPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHMEESP 200
RPY C +C KAF R +H H H+ EKP CT C K F +S L H +H +
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANS 83
Query: 201 HKCPVCSRSFN 233
+ + + N
Sbjct: 84 RRNAAAAAAAN 94
Score = 35.9 bits (79), Expect = 0.004
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 9 RTHTDERPYSCDI--CGKAFRRQDHLRDHRYIHS 104
RTHT E+P+ C C K F R D L H IH+
Sbjct: 46 RTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 279 KPYECNSCGKVFRRNCDLRRHALTH 353
+PY+C C K F R RH TH
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTH 48
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 54.0 bits (124), Expect = 1e-08
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3
Query: 216 CSRSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRHALTH 353
C++ F + NLK+H+ THT+++P++C+ C K F R D RRH H
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Score = 52.8 bits (121), Expect = 3e-08
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 12 THTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVH 173
THT+ RP+ C IC K+F RQ R H +H+ K F C C + F + L H
Sbjct: 593 THTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 50.0 bits (114), Expect = 2e-07
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 132 CGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECNSCGKV 311
C K F ++ L H H P +C +C +SF ++ + + H HT K + C +C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 312 FRRNCDLRRH 341
F R L RH
Sbjct: 637 FARMDALNRH 646
Score = 48.8 bits (111), Expect = 5e-07
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +3
Query: 48 CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRS 227
C K F R +L+ H H+ +PF+C+ C K F + H+ LH C C++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 228 FNQRSNLKTH 257
F + L H
Sbjct: 637 FARMDALNRH 646
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 52.4 bits (120), Expect = 4e-08
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +3
Query: 201 HKCPVCSRSFNQRSNLKTHLLTHTDHKPYECN--SCGKVFRRNCDLRRHALTH 353
++CP C R F+++ + H+ +HT KP+EC+ SC K F R +L RH TH
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 27 RPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHMEES 197
+ Y C C + F RQ+H H H+ EKPF+C+ C K F + L H H+ ++
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
Score = 34.7 bits (76), Expect = 0.009
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 111 KPFKCTECGKGFCQSRTLAVHKILHMEESPHKC--PVCSRSFNQRSNLKTHLLTH 269
K ++C C + F + H H E P +C P C + F +R L H+ TH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.5 bits (68), Expect = 0.088
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 9 RTHTDERPYSCDI--CGKAFRRQDHLRDHRYIHSKE 110
R+HT E+P+ C C K F R+D L H H ++
Sbjct: 24 RSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 279 KPYECNSCGKVFRRNCDLRRHALTH 353
K YEC C +VF R RH +H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSH 26
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +3
Query: 132 CGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECNSCGKV 311
C K + + H H+ + P++C +C F + +LK HL H + +PY C C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 312 FRRNCDLRRH 341
F R L RH
Sbjct: 509 FNRLDALNRH 518
Score = 49.6 bits (113), Expect = 3e-07
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +3
Query: 9 RTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHK 176
+TH +RPY CD+C F R L+ H IH +P+ C EC K F + L HK
Sbjct: 465 QTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRFNRLDALNRHK 519
Score = 45.6 bits (103), Expect = 5e-06
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +3
Query: 48 CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRS 227
C K R+ ++ H H ++P++C C GF + L H +H P+ C C +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 228 FNQRSNLKTH 257
FN+ L H
Sbjct: 509 FNRLDALNRH 518
Score = 44.4 bits (100), Expect = 1e-05
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 216 CSRSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRHALTH 353
C++ ++ N+++H+ TH +PY C+ C F R+ DL+RH H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 48.4 bits (110), Expect = 7e-07
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 201 HKCPVCSRSFNQRSNLKTHLLTHTDHKPYECN--SCGKVFRRNCDLRRHALTH 353
++C C + F++ S+LK H +HT +P+ C+ CGK F ++RRH H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 117 FKCTECGKGFCQSRTLAVHKILHMEESPHKCPV--CSRSFNQRSNLKTHLLTH 269
++CTEC +GF + +L +H H E P C C ++FN RSN++ H H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 33 YSCDICGKAFRRQDHLRDHRYIHSKEKPFKC--TECGKGFCQSRTLAVHKILH 185
Y C C + F R L+ H Y H+ E+PF C CGK F + H+ +H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 38.3 bits (85), Expect = 8e-04
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 12 THTDERPYSCDI--CGKAFRRQDHLRDHRYIH 101
+HT ERP+ CD CGKAF + ++R H+ IH
Sbjct: 489 SHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 46.0 bits (104), Expect = 4e-06
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 27 RPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTE-------CGKGFCQSRTLAVH-KIL 182
+ Y C+ C +AF R +HL+ H H+ EKPF C+E CG+ F + L H + +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 183 HMEESPHK 206
H P +
Sbjct: 128 HRNPQPRR 135
Score = 41.5 bits (93), Expect = 8e-05
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +3
Query: 207 CPVCSRSFNQRSNLKTHLLTHTDHKPYECN-------SCGKVFRRNCDLRRH 341
C C+R+F + +LK H+ +HT+ KP+ C+ CG+ F R L RH
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
Score = 30.7 bits (66), Expect = 0.15
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Frame = +3
Query: 9 RTHTDERPYSCDI-------CGKAFRRQDHLRDHRY-IHSKEKP 116
R+HT+E+P++C CG+ F R+D L H+ IH +P
Sbjct: 90 RSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQP 133
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 279 KPYECNSCGKVFRRNCDLRRHALTH 353
K Y C +C + F R L+RH +H
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSH 92
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 43.6 bits (98), Expect = 2e-05
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 48 CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVH-KILHMEE 194
C K+F R++HLR H H K F C+ C + F +S L H + +H+++
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Score = 41.9 bits (94), Expect = 6e-05
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 210 PVCSRSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRH 341
P C +SF ++ +L+ H TH + K + C+ C + F R+ L RH
Sbjct: 31 PDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 33.9 bits (74), Expect = 0.017
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +3
Query: 9 RTHTDERPYSCDICGKAFRRQDHLRDH-RYIHSK-----EKPFKCTECGKGFC 149
RTH + + +SC C +AF R D L H + +H + E+ C GFC
Sbjct: 48 RTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSERRMLNASCFLGFC 100
Score = 30.7 bits (66), Expect = 0.15
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 117 FKCT--ECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHL 260
F CT +C K F + L H+ H C C+R+F + L H+
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHV 75
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 41.9 bits (94), Expect = 6e-05
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 33 YSCDI--CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVH 173
Y CD C K+F R++H R H H+ K F C C F +S L H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 38.7 bits (86), Expect = 6e-04
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 201 HKCPV--CSRSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRH 341
+KC C++SF ++ + + H +HT+ K + C C F R+ L RH
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +3
Query: 117 FKCT--ECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHL 260
+KC C K F + H H CP CS SF + L H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 41.9 bits (94), Expect = 6e-05
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 78 LRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTH 257
L + I SK + F C +C K F + L HK H + P CP C ++ LK H
Sbjct: 19 LTEPSLIDSK-RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Query: 258 LLT-HTDHKPYE 290
+ H D E
Sbjct: 78 IQRFHNDKSVIE 89
Score = 40.3 bits (90), Expect = 2e-04
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 24 ERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTEC 134
+R + CD C K F R ++L H+ HSK +P C C
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYC 64
Score = 33.1 bits (72), Expect = 0.029
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 207 CPVCSRSFNQRSNLKTHLLTHTDHKPYECNSCGKVFRRNCDLRRH 341
C C++ F + NL H H+ +P C C +R L+RH
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 285 YECNSCGKVFRRNCDLRRHALTHA 356
+ C+ C K F R+ +L RH H+
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHS 54
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 38.3 bits (85), Expect = 8e-04
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 24 ERPYSCDI--CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEES 197
++PY C + C KA++ Q+ L+ H+ +H C + H+ +E
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHK-LHG--------HCSPITTPTPAPIPHQGFVVENK 397
Query: 198 PHKCPVCSRSFNQRSNLKTHLLTHT 272
P++C VCS+ + + LK H TH+
Sbjct: 398 PYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 31.1 bits (67), Expect = 0.12
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +3
Query: 108 EKPFKCT--ECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHK 281
+KP+KC C K + L HK LH SP P + +Q + ++K
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHK-LHGHCSPITTPTPAPIPHQGFVV--------ENK 397
Query: 282 PYECNSCGKVFRRNCDLRRHALTHA 356
PY C C K ++ L+ H TH+
Sbjct: 398 PYRCEVCSKRYKNLNGLKYHR-THS 421
Score = 29.1 bits (62), Expect = 0.47
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 21 DERPYSCDICGKAFRRQDHLRDHR 92
+ +PY C++C K ++ + L+ HR
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYHR 418
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 32.7 bits (71), Expect = 0.038
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 9 RTHTDERPYSCDI--CGKAFRRQDHLRDH-RYIHSKE 110
R+HT E+P+ C + C ++F R D L H R +H +
Sbjct: 98 RSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 31.5 bits (68), Expect = 0.088
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 207 CPVCSRSFNQRSNLKTHLLTHTDHKPYECN--SCGKVFRRNCDLRRHALT 350
CP R L HL +HT KP+ C+ C + F R+ L +H T
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 32.7 bits (71), Expect = 0.038
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +3
Query: 435 GYDDEDPEISSPEHSPVRRARSSSIESIGREQSEERPRLPS 557
GY D SS +HSP R R SS R SEE R+PS
Sbjct: 88 GYGHLDSSFSS-QHSPDNRKRMSSTSVFKRINSEEEGRIPS 127
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 30.3 bits (65), Expect = 0.20
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 132 CGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHL 260
CG GFC + K +E +CP+C R F + HL
Sbjct: 643 CGHGFCYQ---CIQK--RIETRQRRCPICGRGFGASDVIPIHL 680
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 29.9 bits (64), Expect = 0.27
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 7 GGHIPTSVHTPVTFVGKRSGVKTICEIIGIYIPRRNRSNVQ--NVEKVFASRGLWPSTKF 180
G HI TS+ PVT + S I + I ++ +VE V A R WPS
Sbjct: 427 GSHIVTSLG-PVTPMKPGSATLPFFGIDAVIIDPLTGKIIEGNDVEGVLAIRSPWPSAAR 485
Query: 181 CIWKNH 198
+W+ H
Sbjct: 486 TVWRGH 491
>SPAC23A1.02c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 430
Score = 28.7 bits (61), Expect = 0.62
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = -2
Query: 346 KACLRKSQFLLN-----TLPHELHSYGLWSVWVSRCVLRLDRWLKLRLQ 215
KA L++S+F + TL H SY W++ +S CVL + R L + LQ
Sbjct: 380 KASLKQSKFSSDIYATYTLSHGGPSYIWWALHISVCVLTILRLLVISLQ 428
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 93 YIHSKEKPFKCTECGKGFC--QSRTLAVHKILHMEESPHK 206
+I + KC C K FC + ++ A H I H+ + HK
Sbjct: 48 HIKNPNSILKCLHCNKWFCNVRGKSGASHIISHLVRARHK 87
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 27.1 bits (57), Expect = 1.9
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = -3
Query: 477 NVLGKKSQDLHHRNLVLLVILVDRCPLHLHQGHHLE---VRLRRH 352
+++ +K+ DL + NLV LVI+ + LH +G LE R+ RH
Sbjct: 633 DIITRKANDLSYVNLVRLVIIDEVHLLHDERGPVLESIVARIFRH 677
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 417 LVDRCPLHLHQGHHLEVRLRRHVS 346
L C H+H HH +RL R +S
Sbjct: 235 LCSSCVSHVHHDHHSMLRLTREIS 258
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 6 RRTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTE 131
+RTHT D C K + ++RD+ ++SKE+ C E
Sbjct: 577 KRTHTVH-----DKCQKVAKLDHYIRDNIELNSKEREHDCYE 613
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 9 RTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECG 137
R D + Y C C K F D L + + E F C CG
Sbjct: 128 RNDFDSKGYVCPFCNKKFSSLDVLS----LVTNEGTFACNVCG 166
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 157 LDWQKPFPHSVHLNGFSLECIYL 89
LD Q P +H+N LEC+YL
Sbjct: 673 LDKQLVLPFHMHINLELLECVYL 695
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.4 bits (53), Expect = 5.8
Identities = 23/85 (27%), Positives = 30/85 (35%)
Frame = +3
Query: 99 HSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDH 278
H +P C C F + R L IL + + C N+ + KTH H
Sbjct: 662 HPTSEP--CPPCPY-FVKKRCLCGKHILENQPCYRENVRCGELCNKLLSCKTHFCEKLCH 718
Query: 279 KPYECNSCGKVFRRNCDLRRHALTH 353
EC S K + C RR H
Sbjct: 719 PDGECESSCK---KECGKRRMYCEH 740
>SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr
2|||Manual
Length = 116
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +3
Query: 72 DHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSF 230
+ + DH + + E C +C K F + M+ES CP C F
Sbjct: 28 NEIADHPLLKTSELTLICKKCRKAF------RIQFDQTMDESDEYCPNCDNHF 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,507,235
Number of Sequences: 5004
Number of extensions: 55339
Number of successful extensions: 296
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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