Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_G11
         (453 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              96   2e-22
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   6.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.3  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 95.9 bits (228), Expect = 2e-22
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +2

Query: 317 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 451
           EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 45


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/40 (22%), Positives = 18/40 (45%)
 Frame = +1

Query: 331 CLQQLPREVLRTPRRSSHHNRKRKVPLPRGSLPALVLGYG 450
           C++  P   +   RR  H      +P+P+ +   ++  YG
Sbjct: 32  CVRVSPVITIEPRRRKFHKPITLTIPVPQAANKGMINQYG 71


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 119 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 217
           +H +  Y GY  P   +  D A  + T+  MK+
Sbjct: 187 NHQLISYAGYKNPDGTIIGDPANIEFTELCMKL 219


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = +3

Query: 90  VSCWIPAMVYPTQYPSTRVTP--YRTPSCVW 176
           V+CW+P  +     P   V P     P+  W
Sbjct: 316 VACWLPFFILYLATPFVPVEPPDILMPALTW 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,641
Number of Sequences: 438
Number of extensions: 2781
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)