Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_G09
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.07 |ret3||coatomer zeta subunit |Schizosaccharomyces pom... 44 2e-05
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.27
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.46
SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 27 1.9
SPAC31G5.16c |dpm1||dolichol-phosphate mannosyltransferase catal... 26 4.3
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 26 5.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.7
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 7.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.6
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.6
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 25 10.0
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 25 10.0
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 25 10.0
>SPCC576.07 |ret3||coatomer zeta subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 190
Score = 44.4 bits (100), Expect = 2e-05
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 276 GCVPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTSVYKSNVDLFFYVIGSSHD 434
G + KE+K FEK LF KT + +I+ DG V + +D+ FY++G +
Sbjct: 37 GVFNSVKEEKTFEKGLFEKTWKTQNDILTYDGKLVVMLTVMDVIFYIVGGMEE 89
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 203 TMYIIKGMCILDNEGNRILAKF 268
T+Y + ILD+ G RI K+
Sbjct: 4 TLYAVNAFLILDSSGKRIFTKY 25
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 30.3 bits (65), Expect = 0.27
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
S S +SS + ++ S+S+ + S SSK+S ++S SKS S+ +S + S
Sbjct: 155 SSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSS 214
Query: 470 SALSTDCRINSFVM*TT 420
S S+ +SF+ TT
Sbjct: 215 SKSSSKFSSSSFITSTT 231
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.46
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRS 489
T +P +SSVL ++ A + TP++ S S T S ++ ST + S
Sbjct: 3160 TTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSSTTLNTSTPITSS 3219
Query: 488 ILTDS*SALSTDCRINSFVM*TTDDI 411
+ +S +A+++ +NS T+ +
Sbjct: 3220 SVLNSSTAITSSSVLNSSTPITSSSV 3245
Score = 28.7 bits (61), Expect = 0.81
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ + + TP++ S S TA S + ST + S + +S
Sbjct: 3058 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSS 3117
Query: 470 SALSTDCRINSFVM*TTDDI 411
+A+++ +NS T+ I
Sbjct: 3118 TAITSSSILNSSTPITSSSI 3137
Score = 28.7 bits (61), Expect = 0.81
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMD---VGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILT 480
+P +SSVL ++ A V S++ IT S ++S T+IT+S + S ST + S +
Sbjct: 3082 TPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSILNS---STPITSSSIL 3138
Query: 479 DS*SALSTDCRINS 438
+S + +++ +NS
Sbjct: 3139 NSSTPITSSTVVNS 3152
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRS 489
T +P +SSVL ++ A + + TP++ S S TA S + ST + S
Sbjct: 3304 TTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSS 3363
Query: 488 ILTDS*SALSTDCRINS 438
+ +S + +++ +NS
Sbjct: 3364 SVLNSSTPITSSTVVNS 3380
Score = 27.5 bits (58), Expect = 1.9
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMD---VGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ A + S++ IT S ++S T IT+S + S I ST L S
Sbjct: 3106 TPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTS 3165
Query: 488 ILTDS*SALSTDCRINS 438
S S L++ I S
Sbjct: 3166 TPITSSSVLNSSTAITS 3182
Score = 27.1 bits (57), Expect = 2.5
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ + +++ IT S ++S T IT+S + S I ST L S
Sbjct: 382 TPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSS 441
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 442 TPITSSTALNTSTPITS 458
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ A + + TP++ S S T S ++ ST + S + +S
Sbjct: 694 TPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSS 753
Query: 470 SALSTDCRINSFVM*TTDDI 411
+ +++ +NS T+ +
Sbjct: 754 TPITSSSILNSSTPITSSSV 773
Score = 27.1 bits (57), Expect = 2.5
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAARA---TMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ A + + +++ IT S ++S T IT+S + S I ST + S
Sbjct: 1006 TPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 1065
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 1066 TPITSSTALNTSTPITS 1082
Score = 26.6 bits (56), Expect = 3.3
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLS 507
T +P +SSVL ++ ++ V +++ IT S ++S T IT+S + S I S
Sbjct: 556 TVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSSTPITSS 615
Query: 506 TFLRRSILTDS*SALSTDCRINS 438
+ L S S +AL+T I S
Sbjct: 616 SVLNSSTPITSSTALNTSTPITS 638
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ + + TP++ S S T S ++ ST + S + +S
Sbjct: 646 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSS 705
Query: 470 SALSTDCRINSFVM*TTDDI 411
+A+++ +N+ T+ +
Sbjct: 706 TAITSSTALNTSTPITSSSV 725
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ + + TP++ S S TA S ++ ST + S + +S
Sbjct: 670 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSS 729
Query: 470 SALSTDCRINSFVM*TTDDI 411
+ +++ +N+ T+ +
Sbjct: 730 TPITSSTALNTSTPITSSSV 749
Score = 26.6 bits (56), Expect = 3.3
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLSTFLRRS 489
+P +SSVL ++ ++ V S++ IT S ++S T IT+S S I S+ L S
Sbjct: 1930 TPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSS 1989
Query: 488 ILTDS*SALSTDCRINS 438
S S L+T I S
Sbjct: 1990 TPITSSSVLNTSTPITS 2006
Score = 26.6 bits (56), Expect = 3.3
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMD---VGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ A + S++ +T S ++S T IT+S + S I ST L S
Sbjct: 3334 TPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTS 3393
Query: 488 ILTDS*SALSTDCRINS 438
S S L++ I S
Sbjct: 3394 TPITSSSVLNSSTPITS 3410
Score = 26.2 bits (55), Expect = 4.3
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT S ++S T IT+S S I S+ L S
Sbjct: 1546 TPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSS 1605
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 1606 TPITSSTALNTSTPITS 1622
Score = 26.2 bits (55), Expect = 4.3
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLS 507
T +P +SSVL ++ ++ V +++ IT + ++S T IT+S S I S
Sbjct: 3256 TVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSS 3315
Query: 506 TFLRRSILTDS*SALSTDCRINS 438
+ L S S +AL+T I S
Sbjct: 3316 SVLNSSTAITSSTALNTSTPITS 3338
Score = 25.8 bits (54), Expect = 5.7
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ + +++ IT S ++S T IT+S + S I ST + S
Sbjct: 850 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 909
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 910 TPITSSTALNTSTPITS 926
Score = 25.8 bits (54), Expect = 5.7
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ + +++ IT S ++S T IT+S + S I ST + S
Sbjct: 1786 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 1845
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 1846 TPITSSTALNTSTPITS 1862
Score = 25.8 bits (54), Expect = 5.7
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT + ++S T IT+S + S I ST + S
Sbjct: 2242 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSS 2301
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 2302 TPITSSTALNTSTPITS 2318
Score = 25.8 bits (54), Expect = 5.7
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT S ++S T IT+S + S I ST L S
Sbjct: 2314 TPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTS 2373
Query: 488 ILTDS*SALSTDCRINS 438
S S L++ I S
Sbjct: 2374 TSITSSSVLNSSTPITS 2390
Score = 25.8 bits (54), Expect = 5.7
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLS 507
T +P +SSVL ++ ++ V +++ IT + ++S T IT+S S I S
Sbjct: 2896 TVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSS 2955
Query: 506 TFLRRSILTDS*SALSTDCRINS 438
+ L S S +AL+T I S
Sbjct: 2956 SVLNSSTPITSSTALNTSTSITS 2978
Score = 25.8 bits (54), Expect = 5.7
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ V S++ IT + +++ T IT+S + S I ST + S
Sbjct: 3358 TPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSS 3417
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 3418 TPITSSTALNTSTPITS 3434
Score = 25.4 bits (53), Expect = 7.6
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT + ++S T IT+S S I S+ L S
Sbjct: 466 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 526 TPITSSTALNTSTSITS 542
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ + TP++ S S TA S ++ ST + S + +S
Sbjct: 982 TPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSS 1041
Query: 470 SALSTDCRINS 438
+ +++ +N+
Sbjct: 1042 TPITSSTVVNT 1052
Score = 25.4 bits (53), Expect = 7.6
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ + S++ IT S ++S T IT+S + S I ST L S
Sbjct: 1078 TPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTS 1137
Query: 488 ILTDS*SALSTDCRINS 438
S S L++ I S
Sbjct: 1138 TPITSSSVLNSSTPITS 1154
Score = 25.4 bits (53), Expect = 7.6
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ + +++ IT S ++S T IT+S + S I ST + S
Sbjct: 1978 TPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2037
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 2038 TPITSSTALNTSTPITS 2054
Score = 25.4 bits (53), Expect = 7.6
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT + ++S T IT+S S I S+ L S
Sbjct: 2578 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 2638 TPITSSTALNTSTSITS 2654
Score = 25.4 bits (53), Expect = 7.6
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT S ++S T IT+S + S I ST L S
Sbjct: 2722 TPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTS 2781
Query: 488 ILTDS*SALSTDCRINS 438
S S L++ I S
Sbjct: 2782 TPITSSSVLNSSTPITS 2798
Score = 25.4 bits (53), Expect = 7.6
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT + ++S T IT+S + S I S+ L S
Sbjct: 2782 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 2842 TPITSSTALNTSTPITS 2858
Score = 25.4 bits (53), Expect = 7.6
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAARATMD---VGSASRITPLSHISSKTSITASRL---SKSIRLS 507
T +P +SSVL ++ A + S++ IT S ++S T IT+S + S I S
Sbjct: 3208 TTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSS 3267
Query: 506 TFLRRSILTDS*SALSTDCRINS 438
+ L S S + ++T I S
Sbjct: 3268 SVLNSSTPITSSTVVNTSTPITS 3290
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILT 480
+P +SSVL ++ ++ V S++ IT + +++ T IT+S + S ST + S +
Sbjct: 3394 TPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNS---STPITSSSVL 3450
Query: 479 DS*SALSTDCRINSFVM*TTDDI 411
+S +A+++ +NS T+ +
Sbjct: 3451 NSSTAIASSSILNSSTPITSSSV 3473
Score = 25.0 bits (52), Expect = 10.0
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFL 498
T +P +SSVL ++ ++ + S++ IT S ++S T IT+S + + ST +
Sbjct: 784 TVVNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTV---VNTSTPI 840
Query: 497 RRSILTDS*SALSTDCRINS 438
S + +S + +++ +NS
Sbjct: 841 TSSTVVNSSTPITSSSVLNS 860
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ + +++ IT S ++S T IT+S + S I ST L S
Sbjct: 922 TPITSSSVLNSSTPITSSTGLNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTS 981
Query: 488 ILTDS*SALSTDCRINS 438
S S L++ I S
Sbjct: 982 TPITSSSVLNSSTPITS 998
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT + ++S T IT+S S I S+ L S
Sbjct: 1810 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 1870 TPITSSTALNTSTPITS 1886
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT + ++S T IT+S S I S+ L S
Sbjct: 2002 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Query: 488 ILTDS*SALSTDCRINS 438
S +AL+T I S
Sbjct: 2062 TPITSSTALNTSTPITS 2078
Score = 25.0 bits (52), Expect = 10.0
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILT 480
+P +SSVL ++ ++ V S++ IT S ++S T IT+ S ++ ST + S +
Sbjct: 2122 TPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITS---STALNTSTPITSSSVL 2178
Query: 479 DS*SALSTDCRINS 438
+S + +++ +NS
Sbjct: 2179 NSSTPITSSTVVNS 2192
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLS 507
T +P +SSVL ++ ++ V +++ IT + +++ TSIT+S + S I S
Sbjct: 2332 TVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSS 2391
Query: 506 TFLRRSILTDS*SALSTDCRINS 438
T + S S S L++ I S
Sbjct: 2392 TVVNTSTPITSSSVLNSSTPITS 2414
Score = 25.0 bits (52), Expect = 10.0
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ + + TP++ S S T S + ST + S + +S
Sbjct: 2458 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2517
Query: 470 SALSTDCRINSFVM*TTDDI 411
+ +++ +NS T+ +
Sbjct: 2518 TPITSSTVLNSSTPITSSSV 2537
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = -3
Query: 638 TSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRSILTD 477
+SSVL ++ ++ V +++ IT S ++S T IT+S + S I ST + S
Sbjct: 2654 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPIT 2713
Query: 476 S*SALSTDCRINS 438
S +AL+T I S
Sbjct: 2714 SSTALNTSTPITS 2726
Score = 25.0 bits (52), Expect = 10.0
Identities = 17/80 (21%), Positives = 38/80 (47%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ + + TP++ S S T S ++ ST + S + +S
Sbjct: 2830 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSS 2889
Query: 470 SALSTDCRINSFVM*TTDDI 411
+ +++ +N+ T+ +
Sbjct: 2890 TPITSSTVVNTSTPITSSSV 2909
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = -3
Query: 638 TSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRSILTD 477
+SSVL ++ ++ V +++ IT S ++S T IT+S + S I ST + S
Sbjct: 2882 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPIT 2941
Query: 476 S*SALSTDCRINS 438
S +AL+T I S
Sbjct: 2942 SSTALNTSTPITS 2954
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = -3
Query: 638 TSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRSILTD 477
+SSVL ++ ++ V +++ IT S ++S T IT+S + S I ST + S
Sbjct: 2978 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPIT 3037
Query: 476 S*SALSTDCRINS 438
S +AL+T I S
Sbjct: 3038 SSTALNTSTPITS 3050
Score = 25.0 bits (52), Expect = 10.0
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = -3
Query: 668 TWATVCSPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITAS---RLSKSIRLS 507
T +P +SSVL ++ ++ V +++ IT + ++S T IT+S S I S
Sbjct: 2992 TVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSS 3051
Query: 506 TFLRRSILTDS*SALSTDCRINS 438
T L S S S L++ I S
Sbjct: 3052 TVLNSSTPITSSSVLNSSTPITS 3074
Score = 25.0 bits (52), Expect = 10.0
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
+P +SSVL ++ + + TP++ S S TA S + ST + S + +S
Sbjct: 3190 TPITSSSVLNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSS 3249
Query: 470 SALSTDCRINSFVM*TTDDI 411
+ +++ +N+ T+ +
Sbjct: 3250 TPITSSTVVNTSTPITSSSV 3269
Score = 25.0 bits (52), Expect = 10.0
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 650 SPSGTSSVLRAA---RATMDVGSASRITPLSHISSKTSITASRL---SKSIRLSTFLRRS 489
+P +SSVL ++ ++ V +++ IT S ++S T IT+S + S I ST + S
Sbjct: 3238 TPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 3297
Query: 488 ILTDS*SALSTDCRINS 438
S + L+T I S
Sbjct: 3298 TPITSSTTLNTSTPITS 3314
>SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 687
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/59 (20%), Positives = 26/59 (44%)
Frame = -2
Query: 639 HVFSPKGSSSYYGCWIRIQNNSSVAYFVENQHHSVEIVEKYSPFNIPTQEHTNRLVKCI 463
H F K + G + + + ++V HS + + ++P+ +H L++CI
Sbjct: 176 HTFKNKVVKALSGTALALSIAGVLGFYVIGMEHSTYLTRQVFINSVPSLQHMGELLQCI 234
>SPAC31G5.16c |dpm1||dolichol-phosphate mannosyltransferase
catalytic subunit Dpm1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 258 SILLPSLS-KMHIPFIMYIVGSKSEPSMVVWTIVFI 154
S+LLP+ + + ++P I Y++ + + W IV I
Sbjct: 5 SVLLPTYNERKNLPIITYLIAKTFDQEKLDWEIVII 40
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/63 (20%), Positives = 31/63 (49%)
Frame = +1
Query: 436 NELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFDEICDRGVILDADPTSIVAR 615
N +I+ L +L + ++ + E + DN+ + + DE+ D G+I +P ++
Sbjct: 73 NVMIVLEFLESLIQDLTHYFGKLNENTVK-DNVSFIFELLDEMIDYGIIQTTEPDALARS 131
Query: 616 AAL 624
++
Sbjct: 132 VSI 134
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 5.7
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = -3
Query: 662 ATVCSPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFL---RR 492
++ SPS TS + ++ + SAS +P S ISS S +++ LS ++ L
Sbjct: 582 SSTSSPSSTSLSISSSSTSSTFSSASTSSP-SSISSSISSSSTILSSPTPSTSSLMISSS 640
Query: 491 SILTDS*SALST 456
SI++ S S LS+
Sbjct: 641 SIISGSSSILSS 652
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 433 TNELILQSVLNALYESVSMLLRRNVE 510
T L+LQS L SVS LL RN E
Sbjct: 1233 TRYLLLQSTAFGLSRSVSFLLSRNPE 1258
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.6
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = -3
Query: 650 SPSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS* 471
SP+ TSS + ++ ++ +++ T +S SS +S +S LS S S+ S T S
Sbjct: 282 SPTSTSSTISSSSSSSSSPTSTSST-ISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSS 340
Query: 470 SALST 456
S +S+
Sbjct: 341 STISS 345
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 582 NNSSVAYFVENQHHSVEIVEKYSPFNIPTQE 490
+NSS+ +FV N+ S+ + F P+ E
Sbjct: 16 SNSSLNFFVRNREKSIRCSSLHQTFTAPSPE 46
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 310 NAFCSLVVGTHPYRKLGEYSITFIIQD 230
N+ L + THP++ + +S F IQD
Sbjct: 695 NSILQLDIVTHPFKSVYAFSCLFNIQD 721
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.0 bits (52), Expect = 10.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 277 PYRKLGEYSITFIIQDAHSLYYV 209
P +L +YS+ FI+ D + YV
Sbjct: 237 PVSQLSQYSVIFIVPDLYDRVYV 259
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 25.0 bits (52), Expect = 10.0
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -3
Query: 647 PSGTSSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS*S 468
PS S+ L AAR + D SR+ L S T S +++ + L RS+ ++ S
Sbjct: 389 PSKLSTALHAARKSTDGSLGSRVKVLREESQSFVPTKSAVTEQVE-PIQLIRSLSANTVS 447
Query: 467 ALS 459
LS
Sbjct: 448 RLS 450
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,939,946
Number of Sequences: 5004
Number of extensions: 64001
Number of successful extensions: 268
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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