Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_G08
(527 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 100 1e-21
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 100 1e-21
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 80 8e-16
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 80 8e-16
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 77 8e-15
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 77 8e-15
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 75 2e-14
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 74 7e-14
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 36 0.014
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 36 0.014
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 29 2.1
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 29 2.1
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 29 2.7
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical ... 28 4.8
Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 99.5 bits (237), Expect = 1e-21
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDAN-VYRTQFED 406
IANDQ NRTTPSYVAFT LI + VAMNP+NT+FDA + +F+D
Sbjct: 29 IANDQ-GNRTTPSYVAFT-DTERLIG------DAAKNQVAMNPHNTVFDAKRLIGRKFDD 80
Query: 407 ATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 526
VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+S
Sbjct: 81 PAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3
Query: 150 KAPAVGIDLGTTYSCVGVFQHGKVD 224
K AVGIDLGTTYSCVGVF HGKV+
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVE 27
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 99.5 bits (237), Expect = 1e-21
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDAN-VYRTQFED 406
IANDQ NRTTPSYVAFT LI + VAMNP+NT+FDA + +F+D
Sbjct: 29 IANDQ-GNRTTPSYVAFT-DTERLIG------DAAKNQVAMNPHNTVFDAKRLIGRKFDD 80
Query: 407 ATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 526
VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+S
Sbjct: 81 PAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3
Query: 150 KAPAVGIDLGTTYSCVGVFQHGKVD 224
K AVGIDLGTTYSCVGVF HGKV+
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVE 27
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 80.2 bits (189), Expect = 8e-16
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = +2
Query: 200 CVPAWES*RS--IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIF 373
CV +++ R IANDQ NR TPSYVAF+ ++ + Q + +NP NTIF
Sbjct: 46 CVGVYKNGRVEIIANDQ-GNRITPSYVAFSGDQGDRLIGDAAKNQ-----LTINPENTIF 99
Query: 374 DAN-VYRTQFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 526
DA + + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS
Sbjct: 100 DAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/21 (71%), Positives = 21/21 (100%)
Frame = +3
Query: 162 VGIDLGTTYSCVGVFQHGKVD 224
+GIDLGTTYSCVGV+++G+V+
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVE 56
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 80.2 bits (189), Expect = 8e-16
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = +2
Query: 200 CVPAWES*RS--IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIF 373
CV +++ R IANDQ NR TPSYVAF+ ++ + Q + +NP NTIF
Sbjct: 46 CVGVYKNGRVEIIANDQ-GNRITPSYVAFSGDQGDRLIGDAAKNQ-----LTINPENTIF 99
Query: 374 DAN-VYRTQFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 526
DA + + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS
Sbjct: 100 DAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/21 (71%), Positives = 21/21 (100%)
Frame = +3
Query: 162 VGIDLGTTYSCVGVFQHGKVD 224
+GIDLGTTYSCVGV+++G+V+
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVE 56
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 77.0 bits (181), Expect = 8e-15
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDA-NVYRTQFED 406
+AN + N+TTPSYVAFT L+ + A NP NT+FDA + +F++
Sbjct: 29 LANSE-GNKTTPSYVAFT-DTERLV------GDAAKDQAARNPENTVFDAKRLIGRRFDE 80
Query: 407 ATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 526
+TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 81 STVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/22 (77%), Positives = 22/22 (100%)
Frame = +3
Query: 159 AVGIDLGTTYSCVGVFQHGKVD 224
A+GIDLGTTYSCVG++Q+GKV+
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVE 27
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 77.0 bits (181), Expect = 8e-15
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDA-NVYRTQFED 406
+AN + N+TTPSYVAFT L+ + A NP NT+FDA + +F++
Sbjct: 29 LANSE-GNKTTPSYVAFT-DTERLV------GDAAKDQAARNPENTVFDAKRLIGRRFDE 80
Query: 407 ATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 526
+TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 81 STVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/22 (77%), Positives = 22/22 (100%)
Frame = +3
Query: 159 AVGIDLGTTYSCVGVFQHGKVD 224
A+GIDLGTTYSCVG++Q+GKV+
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVE 27
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 75.4 bits (177), Expect = 2e-14
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDANVYRTQF-ED 406
IANDQ NR TPSYVAF+ ++ + Q + +NP NTIFDA +F +
Sbjct: 55 IANDQ-GNRITPSYVAFSGDQGERLIGDAAKNQ-----LTINPENTIFDAKRLIGRFYNE 108
Query: 407 ATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 526
TVQ D+KHWPF++V KP ++V E K F PEEVS
Sbjct: 109 KTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVS 148
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/21 (76%), Positives = 21/21 (100%)
Frame = +3
Query: 162 VGIDLGTTYSCVGVFQHGKVD 224
+GIDLGTTYSCVGVF++G+V+
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVE 53
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 73.7 bits (173), Expect = 7e-14
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 IANDQVXNRTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDA-NVYRTQFED 406
+AN + N+TTPSYVAFT L+ + A NP NT+FDA + +F++
Sbjct: 29 LANSE-GNKTTPSYVAFT-DTERLV------GDAAKDQAARNPENTVFDAKRLIGRRFDE 80
Query: 407 ATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 526
TVQ+D+KHWPF V GKP ++V KGE + F EE+S
Sbjct: 81 ETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/22 (77%), Positives = 22/22 (100%)
Frame = +3
Query: 159 AVGIDLGTTYSCVGVFQHGKVD 224
A+GIDLGTTYSCVG++Q+GKV+
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVE 27
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 36.3 bits (80), Expect = 0.014
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +3
Query: 159 AVGIDLGTTYSCVGVFQHGKVD 224
++GIDLGTT+SCV +Q+G+V+
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVN 23
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 36.3 bits (80), Expect = 0.014
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +3
Query: 159 AVGIDLGTTYSCVGVFQHGKVD 224
++GIDLGTT+SCV +Q+G+V+
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVN 23
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 150 KAPAVGIDLGTTYSCVGVFQ 209
K +GIDLGTT SCV + +
Sbjct: 30 KGHVIGIDLGTTNSCVSIME 49
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 RTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDAN-VYRTQFEDATVQADMK 430
RTTPS VAFT L+ + N NT+F + ++ED VQ D+K
Sbjct: 63 RTTPSTVAFTADGERLVG------APAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLK 116
Query: 431 HWPFEVV 451
P+++V
Sbjct: 117 VVPYKIV 123
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 150 KAPAVGIDLGTTYSCVGVFQ 209
K +GIDLGTT SCV + +
Sbjct: 30 KGHVIGIDLGTTNSCVSIME 49
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 RTTPSYVAFT*HLSCLIV*CSQWFQRSPLGVAMNPNNTIFDAN-VYRTQFEDATVQADMK 430
RTTPS VAFT L+ + N NT+F + ++ED VQ D+K
Sbjct: 63 RTTPSTVAFTADGERLVG------APAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLK 116
Query: 431 HWPFEVV 451
P+++V
Sbjct: 117 VVPYKIV 123
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 165 GIDLGTTYSCVGVF 206
GIDLGTTYS +G++
Sbjct: 37 GIDLGTTYSSIGIY 50
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 344 VAMNPNNTIFD-ANVYRTQFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPE 517
V N NT+ + ++ +F D Q + P +VV ++V+Y GE TF PE
Sbjct: 56 VTTNIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPE 115
Query: 518 EV 523
+V
Sbjct: 116 QV 117
>Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical
protein ZC455.4 protein.
Length = 533
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 314 SQWFQRSPLGVAMNPNNTIFDA--NVYRTQFEDATVQADMKHWPFEVV 451
S W+Q S G A+ + +F A ++ R FED + D+K F+VV
Sbjct: 100 SSWYQ-SDAGAAILLSKYLFPAFEHMCRKMFEDTELHYDLKSRQFDVV 146
>AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical
protein F42G8.5 protein.
Length = 304
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 220 TFPCWNTPTQE*VVPRSIPTAGALPFCFFCILLIIS 113
T P W P ++ + P I AG + F C LIIS
Sbjct: 91 TSPFWTWPYEQRIRPPPIQIAGPILFGLGCSFLIIS 126
>Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical
protein W06D12.2 protein.
Length = 444
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 398 IASDKRWHQRWCYWGSSQHLGDFFETIG 315
I+ D + RW WG + G + TIG
Sbjct: 100 ISIDSKMKTRWDIWGGLYYAGTIYTTIG 127
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 501 LSSPLYATLIFGLPPSLTTSKGQCFMSACTVASSNCVR*TLASKMV 364
+ +P L+FG P + T G+C S C N +L SK V
Sbjct: 345 IRAPPKGVLLFGPPGTGKTMIGRCVASQCKATFFNISASSLTSKWV 390
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,109,278
Number of Sequences: 27780
Number of extensions: 278581
Number of successful extensions: 695
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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