Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_G07
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr... 29 0.55
SPBC2D10.18 |abc1|coq8|ABC1 kinase family protein|Schizosaccharo... 27 1.7
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 27 1.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.2
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 25 6.8
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 25 6.8
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 9.0
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 9.0
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.0
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc... 25 9.0
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 25 9.0
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 9.0
SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.0
>SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 28.7 bits (61), Expect = 0.55
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 209 EPALSFCTHLLYKSAGIQADTYKMVSLNE-NLDIDRAHANYRAITNLKRQFPQLRVFLTV 385
E + F T L K G+ + + V L + + +R R + L+V
Sbjct: 342 EQKVGFKTEELAKELGLSVEEFTKVFLTKIPVKYERMKIYQRTVHVYSDAMRVLQVLKLF 401
Query: 386 GGDDDTEDPQKYNLLFG 436
D++DPQK+ L FG
Sbjct: 402 HQHKDSDDPQKFMLAFG 418
>SPBC2D10.18 |abc1|coq8|ABC1 kinase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 610
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 435 ESPQARTAFTNSALLLAEPYGFDGIDL 515
ES Q A NS LAEP+ FD D+
Sbjct: 517 ESAQMIDAHINSIFTLAEPFAFDAPDV 543
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 191 MLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLD 304
M+ +D EP +S C LL + D + MVS E +
Sbjct: 1281 MVESDYEPDVSLCPELLSLAIDFPGDPFVMVSKMEKYE 1318
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 518 R*IDPVKTIWLSKKKSR-ISKSGTSLRRFQIKDCTSV 411
R ID + + SKK ++ IS + TS RRF+ K C +
Sbjct: 528 RFIDIFEQTFSSKKNAKFISMASTSARRFRWKTCLKI 564
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 220 KSRLQVRRQHTCLRFSDIALAVIVAEDF 137
K RLQ R + +FS + LAV+ A+ F
Sbjct: 1055 KKRLQKRLGYNDTQFSKVKLAVLQAQSF 1082
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/51 (23%), Positives = 19/51 (37%)
Frame = +3
Query: 360 LNCACS*QWEVMTTLKIHRSTIFYLESPQARTAFTNSALLLAEPYGFDGID 512
+NC + W+ L I +F + R NS + + Y G D
Sbjct: 11 INCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKD 61
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 437 FQIKDCTSVDLQCRHHLPLSRTRAIEETVFSSL*SLDN*RAPDQ-CPNS 294
F +K V++ +L LS EE VFS+L ++DN A Q C +S
Sbjct: 946 FVVKSLGYVEISQLKNLTLSLVVNAEEGVFSTLITVDNLDAQVQSCADS 994
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 24.6 bits (51), Expect = 9.0
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +3
Query: 126 VAKAKSSATMTARAISENLKHVCCLRTWSLLFRSAPICCTNLPASKLTHIKWFHSMRIWT 305
+ AKSS + + I + V L+T S L S+PI ++L A+ + HS+
Sbjct: 530 LTNAKSSLSTPSTTIPTSNSSVS-LQTSSSLIISSPIISSSLTATSTSTPALTHSITPSN 588
Query: 306 LIGRTLIIERSQT*KDSFLNCACS 377
+ +I S T S L CS
Sbjct: 589 TSYTSSLIPSSSTDYSSSLITVCS 612
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -3
Query: 487 SARRRAELVKAVRACGDSK*KIVLL 413
+AR+R+ L+ A+R+ GD KIVL+
Sbjct: 390 AARKRSSLLTAIRSLGDR--KIVLI 412
>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 132 KAKSSATMTARAISENLKHVCCLRTWS 212
K K+S R EN+ H+CC T S
Sbjct: 45 KDKNSTLKIDRLFEENVPHLCCQVTAS 71
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 325 ISVRPINVQILIE*NHFICVS 263
I RPI + I+ HFIC S
Sbjct: 197 IHARPIQTSVRIDTTHFICSS 217
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = +2
Query: 296 NLDIDRAHANYRAITNLKRQFPQLRV---FLTVGGDDDTEDPQKYNL 427
++ + AH + N RQFP L V F G D YNL
Sbjct: 950 SIALSTAHVQHGDTLNYSRQFPNLFVQGAFNRFGYDGSMPSKMSYNL 996
>SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 815
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 428 KDCTSVDLQCRHHLPLSR 375
K+C + L+C +H+P SR
Sbjct: 48 KNCKAGKLECTYHMPSSR 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,035,685
Number of Sequences: 5004
Number of extensions: 37425
Number of successful extensions: 129
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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