Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F23
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    27   0.13 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.94 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   0.94 
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   2.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   2.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.9  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   3.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   3.8  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   5.0  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   5.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.7  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 259 KIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRED-LERLKKI 378
           KI  WFL++ K+I+D  Y  L +++   +L  D L R K+I
Sbjct: 275 KIDKWFLHKMKNIID-YYLVLENTDHTKQLSHDVLLRAKQI 314


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 286  QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 384
            + D  +    QLTSS  +S  + D  +LK IRA
Sbjct: 1781 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1813


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 286  QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 384
            + D  +    QLTSS  +S  + D  +LK IRA
Sbjct: 1777 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1809


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 133 VGRRYSNIVLKKADIDLDKRAGECTEEEVEQIVTIMSNPRQYKIPDW 273
           VGRR  ++    A + L     +C+ EE  QI  ++S+ ++    +W
Sbjct: 64  VGRRLKSL----APLVLRGACPQCSPEETRQIKKVLSHIQRTYPKEW 106


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 133 VGRRYSNIVLKKADIDLDKRAGECTEEEVEQIVTIMSNPRQYKIPDW 273
           VGRR  ++    A + L     +C+ EE  QI  ++S+ ++    +W
Sbjct: 64  VGRRLKSL----APLVLRGACPQCSPEETRQIKKVLSHIQRTYPKEW 106


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 361 PNLHEAWSLNWK 326
           P+L + W LNW+
Sbjct: 599 PSLDQVWILNWR 610


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = -3

Query: 266 GILYCLGFDMIVTICSTSSSVHSPARLSRSISAFFNTMLEYRRPTPLI 123
           G +  +G  M+V I  ++ S+ +P+ L     A  N ++ +    P++
Sbjct: 63  GFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCMSPPMV 110


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 178 LYPPFSTQCWNIDV 137
           LYPP   Q WN D+
Sbjct: 94  LYPPNKLQQWNEDL 107


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 178 LYPPFSTQCWNIDV 137
           LYPP   Q WN D+
Sbjct: 109 LYPPNKLQQWNEDL 122


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = -1

Query: 412 DPSSDAYPYEHGSSSAFPNLHEAW 341
           DP    Y +++ +S+ F   ++ W
Sbjct: 420 DPERTPYQWDNSTSAGFSQTNKTW 443


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 78  IHNTKNMLKFVWDHK 34
           IH  K +L   WDHK
Sbjct: 62  IHRKKVLLLVWWDHK 76


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 133 VGRRYSNIVLKKADIDLDKRAGECTEEEVEQIVTI 237
           +G+R S  V         K A   T +E+E+I T+
Sbjct: 3   LGQRISGAVAVLRGTSEVKEAQTSTSDEIEKITTV 37


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -3

Query: 257 YCL--GFDMIVTICSTSSSVHSPARLSRSISAFFN 159
           +C+  G DMIV     S  V  P  + + I+ FF+
Sbjct: 214 FCIVFGSDMIVRSIGNSLMVILPDLVGKKITHFFD 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,758
Number of Sequences: 438
Number of extensions: 2278
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)