Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F22
         (554 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    25   0.51 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   6.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   8.4  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 287 QSHPLQYISFDRTMQDIVYK 346
           Q  PLQ+ SF  T +D++YK
Sbjct: 142 QRCPLQFGSFGYTKRDVIYK 161


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 392 NHAPF*FHCLVN 357
           NH PF FH  +N
Sbjct: 496 NHKPFNFHITIN 507


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 392 NHAPF*FHCLVN 357
           NH PF +H +VN
Sbjct: 494 NHKPFTYHIVVN 505


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 392 NHAPF*FHCLVN 357
           NH PF FH  +N
Sbjct: 496 NHKPFNFHITIN 507


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 392 NHAPF*FHCLVN 357
           NH PF +H +VN
Sbjct: 494 NHKPFTYHIVVN 505


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 392 NHAPF*FHCLVN 357
           NH PF +H +VN
Sbjct: 120 NHKPFTYHIVVN 131


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 473 PDNTDCHRKDEQVNVCLECISTSLR 547
           P+N  C   +   N C+E +  +++
Sbjct: 167 PENNTCSISNSYTNGCVEALKDTVK 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,981
Number of Sequences: 438
Number of extensions: 2977
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)