Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F20
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 262 2e-70
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 8.6
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 8.6
U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 27 8.6
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical
protein Y71A12B.1 protein.
Length = 246
Score = 262 bits (641), Expect = 2e-70
Identities = 126/186 (67%), Positives = 147/186 (79%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
M+LN +YPATG QK FEV +E KLR+F+EKRM EV D LGDEWKGYV+R+ GGNDKQG
Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 391
FPMKQG+LTN RVRLL+ KG SCYR R++GERKRKSVRGCIVDAN+S L+LVIV+KG E
Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGE 120
Query: 392 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKI 571
I GLTD +PR+LGPKRASKIRKLFNL K DDV +YV+ +G + APKI
Sbjct: 121 IEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDG----VTKTIAPKI 176
Query: 572 QRLVTP 589
QRL+TP
Sbjct: 177 QRLITP 182
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 479 EDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRL 580
+DD RRY K L + N KPRYK K +
Sbjct: 276 DDDGRRYFCKLLKQIAQKTANPKPRYKLSKCSHI 309
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -3
Query: 432 PRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRRGL*QEWPFDIKR 253
P T+P+ +P + P T T AKT + ++T +T +P+ + PFD +
Sbjct: 269 PTTTTTTPTTTPTTTTTPTTTTTTAKTTK-STTTTTKTTKTTSTPTTTTTTPKTPFDTSK 327
Query: 252 RT 247
T
Sbjct: 328 CT 329
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +1
Query: 370 CPQRCTGNSWTDXXXXXXXXXXQACV*NPQIIQFKKRRRCASLCCKTPFTCQRGQGKCET 549
CP CT W D V +P ++ +KR C K+P C GQ CE
Sbjct: 49 CP--CTSAIWGDWGAWSTCPT--VTVIDPTVVSVRKRD-----CSKSPLFCSGGQDTCEG 99
Query: 550 QI 555
++
Sbjct: 100 EM 101
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +1
Query: 370 CPQRCTGNSWTDXXXXXXXXXXQACV*NPQIIQFKKRRRCASLCCKTPFTCQRGQGKCET 549
CP CT W D V +P ++ +KR C K+P C GQ CE
Sbjct: 49 CP--CTSAIWGDWGAWSTCPT--VTVIDPTVVSVRKRD-----CSKSPLFCSGGQDTCEG 99
Query: 550 QI 555
++
Sbjct: 100 EM 101
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +1
Query: 370 CPQRCTGNSWTDXXXXXXXXXXQACV*NPQIIQFKKRRRCASLCCKTPFTCQRGQGKCET 549
CP CT W D V +P ++ +KR C K+P C GQ CE
Sbjct: 49 CP--CTSAIWGDWGAWSTCPT--VTVIDPTVVSVRKRD-----CSKSPLFCSGGQDTCEG 99
Query: 550 QI 555
++
Sbjct: 100 EM 101
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +1
Query: 370 CPQRCTGNSWTDXXXXXXXXXXQACV*NPQIIQFKKRRRCASLCCKTPFTCQRGQGKCET 549
CP CT W D V +P ++ +KR C K+P C GQ CE
Sbjct: 49 CP--CTSAIWGDWGAWSTCPT--VTVIDPTVVSVRKRD-----CSKSPLFCSGGQDTCEG 99
Query: 550 QI 555
++
Sbjct: 100 EM 101
>U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical
protein F59A6.4 protein.
Length = 752
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 472 KKRRRCASLCCKTPFTCQRGQGKCETQIQGA*NPEASNTGCSAAQTSSSNPQEET 636
KKR+ A+ +TP G+GK T G NP S T S A T + T
Sbjct: 20 KKRKAVAASKARTPEGS--GRGKKPTTPNGVANPTKSKTKVSTASTMNEKKGAST 72
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +1
Query: 481 RRCASLC-CKTPFTCQRGQGKCE 546
R CA C CK +C R G+CE
Sbjct: 1165 RNCAQRCNCKNGASCDRKTGRCE 1187
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +1
Query: 481 RRCASLC-CKTPFTCQRGQGKCE 546
R CA C CK +C R G+CE
Sbjct: 1165 RNCAQRCNCKNGASCDRKTGRCE 1187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,370,019
Number of Sequences: 27780
Number of extensions: 306225
Number of successful extensions: 825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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