Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F19
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.3  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.0  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   3.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.1  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 66  LMLKHVKIAPLILTTPRQQ 10
           L LKH++ A L+LT P  +
Sbjct: 64  LNLKHLRAAVLVLTNPSNE 82


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 142 RYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQTGPAPENAD 267
           R ++  ++ +K + +  +   +   DSF  DL     P N D
Sbjct: 144 RIIIIDLKTDKILRIYPLKSSDQTSDSFFVDLVIDVDPNNCD 185


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 252 CRPCLQVFEKAIV 214
           CRPC  V E AI+
Sbjct: 115 CRPCTSVEEYAII 127


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 303 QGTSGRRSQGKHEIVPNVVVPDT 371
           QG S RRS     IVP ++ P T
Sbjct: 595 QGHSARRSGDVAVIVPPIIEPFT 617


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 303 QGTSGRRSQGKHEIVPNVVVPDTA 374
           QG S RRS     IVP  + P TA
Sbjct: 595 QGHSARRSGDVAVIVPPKISPFTA 618


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 382 LTLAVSGTTTLGTISCFPWL 323
           L   +SG  + GTI C  W+
Sbjct: 99  LLYEISGNWSFGTIMCDLWV 118


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 240 DRAGTGECRYGLFDFEY 290
           D  GTG  R   ++F+Y
Sbjct: 126 DAHGTGNSRANTYNFDY 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,357
Number of Sequences: 438
Number of extensions: 2068
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)