Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F18
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    48   1e-05
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    48   1e-05
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    48   1e-05
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    31   1.3  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
 Frame = +1

Query: 19   YPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLG 186
            YP L  +D      K+++       ++  +K+ CD   +    EK ++D  ++LK I  G
Sbjct: 3110 YPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKG 3165

Query: 187  LSNIVLSEKSL---LDLPFRAGAVKHVLLTVSEPCIDXXXXXXXXXXXXXKALLENLGMS 357
            ++     EK+    LD PFRAGA K + + V    ++              ++ +  G  
Sbjct: 3166 IAPQA-DEKAFQLALDYPFRAGAAKSI-IGVRSDSLEYKNWWKFVRAQLTGSITKFDGAL 3223

Query: 358  MSIVTVTPELKCGGNLAH-VVGFDESSVLMLGDKKRTKESEALRATLELPSDSCIDFVQT 534
            + ++     L   G L+  ++GF+   V  +  K   K     R  L+  +D  IDFV  
Sbjct: 3224 IHLIAPVKGLSLEGVLSEKLIGFNSRLVATVDGKDSKK-----RTKLQFDNDMGIDFVLN 3278

Query: 535  VDGLVFSSTNYLKLDGGKRKQFL 603
              G VF++ N+ KL    +K+ L
Sbjct: 3279 NGGWVFATQNFEKLKASDQKKML 3301


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
 Frame = +1

Query: 19   YPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLG 186
            YP L  +D      K+++       ++  +K+ CD   +    EK ++D  ++LK I  G
Sbjct: 833  YPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKG 888

Query: 187  LSNIVLSEKSL---LDLPFRAGAVKHVLLTVSEPCIDXXXXXXXXXXXXXKALLENLGMS 357
            ++     EK+    LD PFRAGA K + + V    ++              ++ +  G  
Sbjct: 889  IAPQA-DEKAFQLALDYPFRAGAAKSI-IGVRSDSLEYKNWWKFVRAQLTGSITKFDGAL 946

Query: 358  MSIVTVTPELKCGGNLAH-VVGFDESSVLMLGDKKRTKESEALRATLELPSDSCIDFVQT 534
            + ++     L   G L+  ++GF+   V  +  K   K     R  L+  +D  IDFV  
Sbjct: 947  IHLIAPVKGLSLEGVLSEKLIGFNSRLVATVDGKDSKK-----RTKLQFDNDMGIDFVLN 1001

Query: 535  VDGLVFSSTNYLKLDGGKRKQFL 603
              G VF++ N+ KL    +K+ L
Sbjct: 1002 NGGWVFATQNFEKLKASDQKKML 1024


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
 Frame = +1

Query: 19   YPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLG 186
            YP L  +D      K+++       ++  +K+ CD   +    EK ++D  ++LK I  G
Sbjct: 3110 YPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKG 3165

Query: 187  LSNIVLSEKSL---LDLPFRAGAVKHVLLTVSEPCIDXXXXXXXXXXXXXKALLENLGMS 357
            ++     EK+    LD PFRAGA K + + V    ++              ++ +  G  
Sbjct: 3166 IAPQA-DEKAFQLALDYPFRAGAAKSI-IGVRSDSLEYKNWWKFVRAQLTGSITKFDGAL 3223

Query: 358  MSIVTVTPELKCGGNLAH-VVGFDESSVLMLGDKKRTKESEALRATLELPSDSCIDFVQT 534
            + ++     L   G L+  ++GF+   V  +  K   K     R  L+  +D  IDFV  
Sbjct: 3224 IHLIAPVKGLSLEGVLSEKLIGFNSRLVATVDGKDSKK-----RTKLQFDNDMGIDFVLN 3278

Query: 535  VDGLVFSSTNYLKLDGGKRKQFL 603
              G VF++ N+ KL    +K+ L
Sbjct: 3279 NGGWVFATQNFEKLKASDQKKML 3301


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
            protein.
          Length = 4129

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -1

Query: 251  LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 96
            +TA    GR+  DF+L  +++KP+FI+    +SI  +     VS  VL  G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,692,942
Number of Sequences: 53049
Number of extensions: 484029
Number of successful extensions: 1296
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)