Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F13
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 32 1.8
BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 32 1.8
AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens ... 32 1.8
AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens ... 32 1.8
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 31 3.2
BC013409-1|AAH13409.2| 303|Homo sapiens SAP30BP protein protein. 31 3.2
AK056881-1|BAB71301.1| 494|Homo sapiens protein ( Homo sapiens ... 31 3.2
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 31 3.2
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 31 3.2
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 31 4.2
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 31 4.2
X77225-1|CAA54442.1| 376|Homo sapiens TFIIA/alpha, p55 protein. 31 4.2
X75383-2|CAA53152.1| 337|Homo sapiens TFIIA protein. 31 4.2
X75383-1|CAA53151.1| 376|Homo sapiens TFIIA protein. 31 4.2
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 31 4.2
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 31 4.2
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 31 4.2
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 31 4.2
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 31 4.2
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 31 4.2
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 31 4.2
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 31 4.2
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 31 4.2
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 31 4.2
D14887-1|BAA03604.1| 376|Homo sapiens 'TFIIA-42' protein. 31 4.2
D14886-1|BAA03603.1| 337|Homo sapiens TFIIA-37 protein. 31 4.2
BC107156-1|AAI07157.1| 376|Homo sapiens general transcription f... 31 4.2
BC107155-1|AAI07156.1| 376|Homo sapiens general transcription f... 31 4.2
BC063793-1|AAH63793.1| 308|Homo sapiens SAP30 binding protein p... 31 4.2
BC030233-1|AAH30233.1| 308|Homo sapiens SAP30 binding protein p... 31 4.2
BC007592-1|AAH07592.1| 308|Homo sapiens SAP30BP protein protein. 31 4.2
AY082382-1|AAL92491.1| 308|Homo sapiens HCNGP protein. 31 4.2
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 31 4.2
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 31 4.2
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 31 4.2
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 31 4.2
AF450482-1|AAL47177.1| 308|Homo sapiens transcription-regulatin... 31 4.2
AF119664-1|AAF17221.1| 308|Homo sapiens transcriptional regulat... 31 4.2
AC010582-2|AAF26776.1| 376|Homo sapiens TFIIA-42 protein. 31 4.2
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 31 4.2
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat... 31 4.2
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 31 4.2
Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor... 30 5.6
U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein. 30 5.6
BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor... 30 5.6
BC091526-1|AAH91526.2| 149|Homo sapiens SOBP protein protein. 30 5.6
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 30 5.6
BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific fact... 30 5.6
AY956765-1|AAX38252.1| 505|Homo sapiens heat shock protein 90Bd... 30 5.6
AK090879-1|BAC03537.1| 232|Homo sapiens protein ( Homo sapiens ... 30 5.6
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 30 5.6
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 30 5.6
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 30 5.6
AF461041-1|AAL67803.1| 2316|Homo sapiens AF15q14 isoform 2 protein. 30 7.4
AF248041-1|AAF97513.1| 1833|Homo sapiens AF15q14 protein protein. 30 7.4
AF173994-1|AAM45143.1| 2342|Homo sapiens AF15q14 protein. 30 7.4
AF087869-1|AAM10497.1| 308|Homo sapiens HCNGP protein. 30 7.4
AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor... 30 7.4
AB022190-1|BAC05691.1| 1746|Homo sapiens D40 protein. 30 7.4
BC099739-1|AAH99739.1| 796|Homo sapiens solute carrier family 4... 29 9.8
BC099711-1|AAH99711.1| 796|Homo sapiens solute carrier family 4... 29 9.8
BC098358-1|AAH98358.1| 796|Homo sapiens solute carrier family 4... 29 9.8
BC098302-1|AAH98302.1| 796|Homo sapiens solute carrier family 4... 29 9.8
AY028435-1|AAK29177.1| 796|Homo sapiens adaptor protein kanadap... 29 9.8
AK001486-1|BAA91718.1| 796|Homo sapiens protein ( Homo sapiens ... 29 9.8
AC074091-2|AAX93203.1| 796|Homo sapiens unknown protein. 29 9.8
>BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 31.9 bits (69), Expect = 1.8
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDN--STIEMDQSDINLKYSDDEEPKKEKV-GDESKKTTEEGNQKVPQ 373
D N+ + + M +D+ S MD+ + S++EE KK+K+ DE +K EE +KV +
Sbjct: 334 DRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEE--EKVAK 391
Query: 374 SSVELVTEDAMELNIDTVASKPVA------MDVVDAPLSVPEIVIEKVSTVESKAKEITD 535
++++ E S+ V+ D V E I S E KE++D
Sbjct: 392 RKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSE-EEAGKELSD 450
Query: 536 KINKQ 550
K N++
Sbjct: 451 KKNEE 455
>BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 31.9 bits (69), Expect = 1.8
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDN--STIEMDQSDINLKYSDDEEPKKEKV-GDESKKTTEEGNQKVPQ 373
D N+ + + M +D+ S MD+ + S++EE KK+K+ DE +K EE +KV +
Sbjct: 334 DRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEE--EKVAK 391
Query: 374 SSVELVTEDAMELNIDTVASKPVA------MDVVDAPLSVPEIVIEKVSTVESKAKEITD 535
++++ E S+ V+ D V E I S E KE++D
Sbjct: 392 RKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSE-EEAGKELSD 450
Query: 536 KINKQ 550
K N++
Sbjct: 451 KKNEE 455
>AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens
cDNA FLJ14655 fis, clone NT2RP2002292. ).
Length = 819
Score = 31.9 bits (69), Expect = 1.8
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDN--STIEMDQSDINLKYSDDEEPKKEKV-GDESKKTTEEGNQKVPQ 373
D N+ + + M +D+ S MD+ + S++EE KK+K+ DE +K EE +KV +
Sbjct: 334 DRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEE--EKVAK 391
Query: 374 SSVELVTEDAMELNIDTVASKPVA------MDVVDAPLSVPEIVIEKVSTVESKAKEITD 535
++++ E S+ V+ D V E I S E KE++D
Sbjct: 392 RKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSE-EEAGKELSD 450
Query: 536 KINKQ 550
K N++
Sbjct: 451 KKNEE 455
>AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ10006 fis, clone HEMBA1000168, weakly similar to
CYLICIN I. ).
Length = 489
Score = 31.9 bits (69), Expect = 1.8
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDN--STIEMDQSDINLKYSDDEEPKKEKV-GDESKKTTEEGNQKVPQ 373
D N+ + + M +D+ S MD+ + S++EE KK+K+ DE +K EE +KV +
Sbjct: 127 DRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEE--EKVAK 184
Query: 374 SSVELVTEDAMELNIDTVASKPVA------MDVVDAPLSVPEIVIEKVSTVESKAKEITD 535
++++ E S+ V+ D V E I S E KE++D
Sbjct: 185 RKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSE-EEAGKELSD 243
Query: 536 KINKQ 550
K N++
Sbjct: 244 KKNEE 248
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil domain
containing 2 protein.
Length = 1583
Score = 31.1 bits (67), Expect = 3.2
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Frame = +2
Query: 215 QAQLSLMTDDNSTIEMDQSDINLKYSDDEEP-KKEKVGDESKKT--TEEGNQKVPQSSVE 385
Q+ L M + N ++ ++ ++ + + K ++ +E +K E N K E
Sbjct: 757 QSDLLEMKNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKE 816
Query: 386 LVTEDA-MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINK 547
L A + L D++A P V + PLS + + EK+ +E + KE +KINK
Sbjct: 817 LRDRRAELILLKDSLAKSP---SVKNDPLSSVKELEEKIENLEKECKEKEEKINK 868
>BC013409-1|AAH13409.2| 303|Homo sapiens SAP30BP protein protein.
Length = 303
Score = 31.1 bits (67), Expect = 3.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSV 382
D + S + D E ++ D N + S+D++ + EK + K E ++ PQ V
Sbjct: 39 DAYGEDDFSRLGGDEDGYE-EEEDENSRQSEDDDSETEKPEADDPKNNTEAEKRDPQELV 97
Query: 383 ELVTEDAMELNIDTVASKP 439
+E ++ D + P
Sbjct: 98 ASFSERVRNMSPDEIKIPP 116
>AK056881-1|BAB71301.1| 494|Homo sapiens protein ( Homo sapiens
cDNA FLJ32319 fis, clone PROST2003472. ).
Length = 494
Score = 31.1 bits (67), Expect = 3.2
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Frame = +2
Query: 245 NSTIEMDQSDINLKYSDDEEPKKEKV-GDESKKTTEEGNQKVPQSSVELVTEDAMELNID 421
+S MD+ + S++EE KK+K+ DE +K EE +KV + ++++ E
Sbjct: 25 HSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEE--EKVAKRKAAVLSDSEDEEKAS 82
Query: 422 TVASKPVA------MDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
S+ V+ D V E I S E KE++DK N++
Sbjct: 83 AKKSRVVSDADDSDSDAVSDKSGKREKTIASDSE-EEAGKELSDKKNEE 130
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 31.1 bits (67), Expect = 3.2
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Frame = +2
Query: 215 QAQLSLMTDDNSTIEMDQSDINLKYSDDEEP-KKEKVGDESKKT--TEEGNQKVPQSSVE 385
Q+ L M + N ++ ++ ++ + + K ++ +E +K E N K E
Sbjct: 757 QSDLLEMKNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKE 816
Query: 386 LVTEDA-MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINK 547
L A + L D++A P V + PLS + + EK+ +E + KE +KINK
Sbjct: 817 LRDRRAELILLKDSLAKSP---SVKNDPLSSVKELEEKIENLEKECKEKEEKINK 868
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 31.1 bits (67), Expect = 3.2
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Frame = +2
Query: 215 QAQLSLMTDDNSTIEMDQSDINLKYSDDEEP-KKEKVGDESKKT--TEEGNQKVPQSSVE 385
Q+ L M + N ++ ++ ++ + + K ++ +E +K E N K E
Sbjct: 809 QSDLLEMKNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKE 868
Query: 386 LVTEDA-MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINK 547
L A + L D++A P V + PLS + + EK+ +E + KE +KINK
Sbjct: 869 LRDRRAELILLKDSLAKSP---SVKNDPLSSVKELEEKIENLEKECKEKEEKINK 920
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 949 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1056
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 911 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 970
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 971 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1018
>X77225-1|CAA54442.1| 376|Homo sapiens TFIIA/alpha, p55 protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 266 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 312
>X75383-2|CAA53152.1| 337|Homo sapiens TFIIA protein.
Length = 337
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 227 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 273
>X75383-1|CAA53151.1| 376|Homo sapiens TFIIA protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 266 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 312
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 832 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 891
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 892 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 939
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 949 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1056
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 911 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 970
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 971 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1018
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 949 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1056
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 745 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 804
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 805 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 852
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 745 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 804
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 805 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 852
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 794 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 853
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 854 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 901
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 832 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 891
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 892 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 939
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 90 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 149
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 150 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 197
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 949 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1056
>D14887-1|BAA03604.1| 376|Homo sapiens 'TFIIA-42' protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 266 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 312
>D14886-1|BAA03603.1| 337|Homo sapiens TFIIA-37 protein.
Length = 337
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 227 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 273
>BC107156-1|AAI07157.1| 376|Homo sapiens general transcription
factor IIA, 1, 19/37kDa protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 266 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 312
>BC107155-1|AAI07156.1| 376|Homo sapiens general transcription
factor IIA, 1, 19/37kDa protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 266 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 312
>BC063793-1|AAH63793.1| 308|Homo sapiens SAP30 binding protein
protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSV 382
D + S + D E ++ D N + S+D++ + EK + K E ++ PQ V
Sbjct: 44 DAYGEDDFSRLGGDEDGYE-EEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV 102
Query: 383 ELVTEDAMELNIDTVASKP 439
+E ++ D + P
Sbjct: 103 ASFSERVRNMSPDEIKIPP 121
>BC030233-1|AAH30233.1| 308|Homo sapiens SAP30 binding protein
protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSV 382
D + S + D E ++ D N + S+D++ + EK + K E ++ PQ V
Sbjct: 44 DAYGEDDFSRLGGDEDGYE-EEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV 102
Query: 383 ELVTEDAMELNIDTVASKP 439
+E ++ D + P
Sbjct: 103 ASFSERVRNMSPDEIKIPP 121
>BC007592-1|AAH07592.1| 308|Homo sapiens SAP30BP protein protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSV 382
D + S + D E ++ D N + S+D++ + EK + K E ++ PQ V
Sbjct: 44 DAYGEDDFSRLGGDEDGYE-EEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV 102
Query: 383 ELVTEDAMELNIDTVASKP 439
+E ++ D + P
Sbjct: 103 ASFSERVRNMSPDEIKIPP 121
>AY082382-1|AAL92491.1| 308|Homo sapiens HCNGP protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSV 382
D + S + D E ++ D N + S+D++ + EK + K E ++ PQ V
Sbjct: 44 DAYGEDDFSRLGGDEDGYE-EEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV 102
Query: 383 ELVTEDAMELNIDTVASKP 439
+E ++ D + P
Sbjct: 103 ASFSERVRNMSPDEIKIPP 121
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 949 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1056
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 911 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 970
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 971 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1018
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 949 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1056
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 911 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 970
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 971 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1018
>AF450482-1|AAL47177.1| 308|Homo sapiens transcription-regulating
protein protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSV 382
D + S + D E ++ D N + S+D++ + EK + K E ++ PQ V
Sbjct: 44 DAYGEDDFSRLGGDEDGYE-EEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV 102
Query: 383 ELVTEDAMELNIDTVASKP 439
+E ++ D + P
Sbjct: 103 ASFSERVRNMSPDEIKIPP 121
>AF119664-1|AAF17221.1| 308|Homo sapiens transcriptional regulator
protein HCNGP protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 203 DPLNQAQLSLMTDDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSV 382
D + S + D E ++ D N + S+D++ + EK + K E ++ PQ V
Sbjct: 44 DAYGEDDFSRLGGDEDGYE-EEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV 102
Query: 383 ELVTEDAMELNIDTVASKP 439
+E ++ D + P
Sbjct: 103 ASFSERVRNMSPDEIKIPP 121
>AC010582-2|AAF26776.1| 376|Homo sapiens TFIIA-42 protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 QAQLSLMTDDNS-TIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE 352
QA L L D T + D Y DDEE KEK G E + EE
Sbjct: 266 QAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEE 312
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 246 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 305
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 306 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 353
>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
ATRX isoform 2 variant protein.
Length = 1383
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 914 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 973
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 974 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1021
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 230 LMTDDNSTIEMDQSDINLKY--SDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDA 403
L T ++ SDI K+ D + E +SKK TEE + + E
Sbjct: 949 LKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQ 1008
Query: 404 MELNIDTVASKPVAMDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQ 550
E + D P ++ P + +I + E K+K+I DK +K+
Sbjct: 1009 YESSSDGTEKLPEREEICHFPKGIKQIK-NGTTDGEKKSKKIRDKTSKK 1056
>Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 755
Score = 30.3 bits (65), Expect = 5.6
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2
Query: 239 DDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE--GNQKVPQSSVELVTEDAMEL 412
++N + + D+N + ++ P KE D+S+K ++E ++ S E+ +E
Sbjct: 513 EENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEK 572
Query: 413 NIDTVAS-KPVAMDVVDAPL 469
++D S K + +V+D L
Sbjct: 573 DLDEEGSEKELHENVLDKEL 592
>U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein.
Length = 754
Score = 30.3 bits (65), Expect = 5.6
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2
Query: 239 DDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE--GNQKVPQSSVELVTEDAMEL 412
++N + + D+N + ++ P KE D+S+K ++E ++ S E+ +E
Sbjct: 512 EENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEK 571
Query: 413 NIDTVAS-KPVAMDVVDAPL 469
++D S K + +V+D L
Sbjct: 572 DLDEEGSEKELHENVLDKEL 591
>BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor 1
protein.
Length = 755
Score = 30.3 bits (65), Expect = 5.6
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2
Query: 239 DDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE--GNQKVPQSSVELVTEDAMEL 412
++N + + D+N + ++ P KE D+S+K ++E ++ S E+ +E
Sbjct: 513 EENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEK 572
Query: 413 NIDTVAS-KPVAMDVVDAPL 469
++D S K + +V+D L
Sbjct: 573 DLDEEGSEKELHENVLDKEL 592
>BC091526-1|AAH91526.2| 149|Homo sapiens SOBP protein protein.
Length = 149
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 300 KNQRKRKSAMKVKRQLKKEIRKYPNHQLNLLL 395
+N+R RK A VKR++ +E++ + + +N LL
Sbjct: 12 ENKRSRKPAHPVKREINEEMKNFAENTMNELL 43
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 30.3 bits (65), Expect = 5.6
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 248 STIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTE-DAMELNIDT 424
++IEMD ++++S+D + K K + K TE GN K V+L E ++E N
Sbjct: 247 NSIEMD----SMRHSEDFKEKLPKGNGKRKSDTEFGNMK---KKVKLSKEHQSLEENQRQ 299
Query: 425 VASKPVA-MDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQINTIES 568
SK A D +++P P+I+ + +S ES + K +IN ++S
Sbjct: 300 TRSKRKATSDTLESP---PKIIPKYISENES-PRPSQKKSRVKINWLKS 344
>BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific factor
1 protein.
Length = 755
Score = 30.3 bits (65), Expect = 5.6
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2
Query: 239 DDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE--GNQKVPQSSVELVTEDAMEL 412
++N + + D+N + ++ P KE D+S+K ++E ++ S E+ +E
Sbjct: 513 EENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEK 572
Query: 413 NIDTVAS-KPVAMDVVDAPL 469
++D S K + +V+D L
Sbjct: 573 DLDEEGSEKELHENVLDKEL 592
>AY956765-1|AAX38252.1| 505|Homo sapiens heat shock protein 90Bd
protein.
Length = 505
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 293 DDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDAMELN 415
D E+PK E VG + + T++ N+K + E T D ELN
Sbjct: 217 DKEKPKTEDVGSDEEDDTDKNNKKKTKKIKEKYT-DREELN 256
>AK090879-1|BAC03537.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ33560 fis, clone BRAMY2009557. ).
Length = 232
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 300 KNQRKRKSAMKVKRQLKKEIRKYPNHQLNLLL 395
+N+R RK A VKR++ +E++ + + +N LL
Sbjct: 12 ENKRSRKPAHPVKREINEEMKNFAENTMNELL 43
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 30.3 bits (65), Expect = 5.6
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 248 STIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTE-DAMELNIDT 424
++IEMD ++++S+D + K K + K TE GN K V+L E ++E N
Sbjct: 247 NSIEMD----SMRHSEDFKEKLPKGNGKRKSDTEFGNMK---KKVKLSKEHQSLEENQRQ 299
Query: 425 VASKPVA-MDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQINTIES 568
SK A D +++P P+I+ + +S ES + K +IN ++S
Sbjct: 300 TRSKRKATSDTLESP---PKIIPKYISENES-PRPSQKKSRVKINWLKS 344
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 30.3 bits (65), Expect = 5.6
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 248 STIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTE-DAMELNIDT 424
++IEMD ++++S+D + K K + K TE GN K V+L E ++E N
Sbjct: 48 NSIEMD----SMRHSEDFKEKLPKGNGKRKSDTEFGNMK---KKVKLSKEHQSLEENQRQ 100
Query: 425 VASKPVA-MDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQINTIES 568
SK A D +++P P+I+ + +S ES + K +IN ++S
Sbjct: 101 TRSKRKATSDTLESP---PKIIPKYISENES-PRPSQKKSRVKINWLKS 145
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 30.3 bits (65), Expect = 5.6
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 248 STIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTE-DAMELNIDT 424
++IEMD ++++S+D + K K + K TE GN K V+L E ++E N
Sbjct: 247 NSIEMD----SMRHSEDFKEKLPKGNGKRKSDTEFGNMK---KKVKLSKEHQSLEENQRQ 299
Query: 425 VASKPVA-MDVVDAPLSVPEIVIEKVSTVESKAKEITDKINKQINTIES 568
SK A D +++P P+I+ + +S ES + K +IN ++S
Sbjct: 300 TRSKRKATSDTLESP---PKIIPKYISENES-PRPSQKKSRVKINWLKS 344
>AF461041-1|AAL67803.1| 2316|Homo sapiens AF15q14 isoform 2 protein.
Length = 2316
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 242 DNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDAMELNID 421
DN + DQS++ + + P+KE + T+E+G V +SV V+++ ++ ++
Sbjct: 495 DNQIFKQDQSNVQIAAAPT--PEKEMMLQNLMTTSEDGKMNVNCNSVPHVSKERIQQSL- 551
Query: 422 TVASKPVAMDVVD 460
S P+++ + D
Sbjct: 552 ---SNPLSISLTD 561
>AF248041-1|AAF97513.1| 1833|Homo sapiens AF15q14 protein protein.
Length = 1833
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 242 DNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDAMELNID 421
DN + DQS++ + + P+KE + T+E+G V +SV V+++ ++ ++
Sbjct: 495 DNQIFKQDQSNVQIAAAPT--PEKEMMLQNLMTTSEDGKMNVNCNSVPHVSKERIQQSL- 551
Query: 422 TVASKPVAMDVVD 460
S P+++ + D
Sbjct: 552 ---SNPLSISLTD 561
>AF173994-1|AAM45143.1| 2342|Homo sapiens AF15q14 protein.
Length = 2342
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 242 DNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDAMELNID 421
DN + DQS++ + + P+KE + T+E+G V +SV V+++ ++ ++
Sbjct: 521 DNQIFKQDQSNVQIAAAPT--PEKEMMLQNLMTTSEDGKMNVNCNSVPHVSKERIQQSL- 577
Query: 422 TVASKPVAMDVVD 460
S P+++ + D
Sbjct: 578 ---SNPLSISLTD 587
>AF087869-1|AAM10497.1| 308|Homo sapiens HCNGP protein.
Length = 308
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDAMELNIDTVASKP 439
++ D N + S+D++ + EK + K E ++ PQ V +E ++ D + P
Sbjct: 63 EEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIPP 121
>AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor 1
variant protein.
Length = 758
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2
Query: 239 DDNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEE--GNQKVPQSSVELVTEDAMEL 412
++N + + D+N + ++ P KE D+S+K ++E ++ S E+ +E
Sbjct: 516 EENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEK 575
Query: 413 NIDTVAS-KPVAMDVVDAPL 469
++D S K + +++D L
Sbjct: 576 DLDEEGSEKELHENILDKEL 595
>AB022190-1|BAC05691.1| 1746|Homo sapiens D40 protein.
Length = 1746
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 242 DNSTIEMDQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVELVTEDAMELNID 421
DN + DQS++ + + P+KE + T+E+G V +SV V+++ ++ ++
Sbjct: 495 DNQIFKQDQSNVQIAAAPT--PEKEMMLQNLMTTSEDGKMNVNCNSVPHVSKERIQQSL- 551
Query: 422 TVASKPVAMDVVD 460
S P+++ + D
Sbjct: 552 ---SNPLSISLTD 561
>BC099739-1|AAH99739.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVE 385
D+ ++ + ++EE +KEK E KK E+G+ PQ +E
Sbjct: 643 DEPEVEEEEEEEEEEEKEKEEHEKKK-LEDGSLSRPQPEIE 682
>BC099711-1|AAH99711.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVE 385
D+ ++ + ++EE +KEK E KK E+G+ PQ +E
Sbjct: 643 DEPEVEEEEEEEEEEEKEKEEHEKKK-LEDGSLSRPQPEIE 682
>BC098358-1|AAH98358.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVE 385
D+ ++ + ++EE +KEK E KK E+G+ PQ +E
Sbjct: 643 DEPEVEEEEEEEEEEEKEKEEHEKKK-LEDGSLSRPQPEIE 682
>BC098302-1|AAH98302.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVE 385
D+ ++ + ++EE +KEK E KK E+G+ PQ +E
Sbjct: 643 DEPEVEEEEEEEEEEEKEKEEHEKKK-LEDGSLSRPQPEIE 682
>AY028435-1|AAK29177.1| 796|Homo sapiens adaptor protein kanadaptin
protein.
Length = 796
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVE 385
D+ ++ + ++EE +KEK E KK E+G+ PQ +E
Sbjct: 643 DEPEVEEEEEEEEEEEKEKEEHEKKK-LEDGSLSRPQPEIE 682
>AK001486-1|BAA91718.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ10624 fis, clone NT2RP2005525, highly similar to
Mus musculus kanadaptin mRNA. ).
Length = 796
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVE 385
D+ ++ + ++EE +KEK E KK E+G+ PQ +E
Sbjct: 643 DEPEVEEEEEEEEEEEKEKEEHEKKK-LEDGSLSRPQPEIE 682
>AC074091-2|AAX93203.1| 796|Homo sapiens unknown protein.
Length = 796
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 263 DQSDINLKYSDDEEPKKEKVGDESKKTTEEGNQKVPQSSVE 385
D+ ++ + ++EE +KEK E KK E+G+ PQ +E
Sbjct: 643 DEPEVEEEEEEEEEEEKEKEEHEKKK-LEDGSLSRPQPEIE 682
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,355,400
Number of Sequences: 237096
Number of extensions: 959151
Number of successful extensions: 4130
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 3707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4076
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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