Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F12
(569 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 242 2e-64
03_01_0547 + 4093196-4093657,4094267-4095148 242 2e-64
03_01_0544 + 4082528-4082989,4083585-4084466 242 2e-64
03_01_0543 + 4076981-4077442,4078145-4079026 242 2e-64
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 63 1e-10
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 55 3e-08
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 55 3e-08
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 52 4e-07
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 46 3e-05
02_04_0462 + 23131433-23132836 42 3e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 36 0.030
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 30 1.5
05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152 29 2.6
02_03_0125 + 15529391-15529495,15530066-15530226,15530315-155305... 29 2.6
11_06_0516 + 24502645-24504507 29 3.4
10_08_1038 - 22485394-22485960,22486712-22487197 28 4.6
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 4.6
11_06_0596 + 25385744-25388890 28 6.0
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 28 6.0
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 6.0
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 27 8.0
11_04_0242 - 15273774-15274043,15274131-15274235 27 8.0
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 8.0
03_05_0896 - 28592658-28593331,28594069-28595455 27 8.0
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 242 bits (592), Expect = 2e-64
Identities = 107/150 (71%), Positives = 131/150 (87%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPG
Sbjct: 280 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPG 339
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLC 368
QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 369 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 458
VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 400 VETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 242 bits (592), Expect = 2e-64
Identities = 107/150 (71%), Positives = 131/150 (87%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPG
Sbjct: 280 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPG 339
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLC 368
QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 369 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 458
VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 400 VETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 242 bits (592), Expect = 2e-64
Identities = 107/150 (71%), Positives = 131/150 (87%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPG
Sbjct: 280 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPG 339
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLC 368
QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 369 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 458
VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 400 VETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 242 bits (592), Expect = 2e-64
Identities = 107/150 (71%), Positives = 131/150 (87%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPG
Sbjct: 280 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPG 339
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLC 368
QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 369 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 458
VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 400 VETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 63.3 bits (147), Expect = 1e-10
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--H 182
+ + ++ A P +NV + + +++ G+V S NP +F AQ+ +L
Sbjct: 272 ISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVLS-SIGNPVGAVTEFNAQLQILELLD 330
Query: 183 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKS-------IKSGDAAIV 341
+ GY VL H+ C+ ++ E++D + K + K +K+G +
Sbjct: 331 NAIFTAGYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVC 390
Query: 342 NLVPSKPLCVESFQEFPPLGRFAVR 416
+ + +C+E+F +FP LGRF +R
Sbjct: 391 RIQVNNLICIENFSDFPQLGRFTLR 415
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 55.2 bits (127), Expect = 3e-08
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVIVLN 179
+E + A GDNV +++ + +L + G NP P ++F +V+VL+
Sbjct: 527 IERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLD 582
Query: 180 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 359
I GY H A + +I +D+ GK ++ P+ +KS A+V +
Sbjct: 583 VTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDA 641
Query: 360 PLCVESFQEFPPLGRFAVRDMRQTVAVGVI 449
P+CV+ F + LGR +R T+AVGV+
Sbjct: 642 PVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 55.2 bits (127), Expect = 3e-08
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVIVLN 179
+E + A GDNV +++ + +L + G NP P ++F +V+VL+
Sbjct: 527 IERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLD 582
Query: 180 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 359
I GY H A + +I +D+ GK ++ P+ +KS A+V +
Sbjct: 583 VTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDA 641
Query: 360 PLCVESFQEFPPLGRFAVRDMRQTVAVGVI 449
P+CV+ F + LGR +R T+AVGV+
Sbjct: 642 PVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 51.6 bits (118), Expect = 4e-07
Identities = 35/150 (23%), Positives = 68/150 (45%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
+E + + A GDNV ++ + + G V + P A+ +++VL+
Sbjct: 511 IERNSSSCNLARAGDNVAIGLQGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLDITV 569
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLC 368
I G ++ +I ++++TGK+++ P+ + S A++ + K +C
Sbjct: 570 PILVGL---------QVSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVC 620
Query: 369 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 458
VE F LGR +R T+AVG++ V
Sbjct: 621 VEEFSNLKALGRVFLRSQGNTIAVGIVSRV 650
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--H 182
V + ++ A PG+NV + + ++ G+V K NP ++F AQ+ +L
Sbjct: 227 VHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLD 285
Query: 183 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIK 320
+ GY VL H+ C+ E+ E++D + K + K K
Sbjct: 286 NAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRRKEGDIKKKKSK 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 3/155 (1%)
Frame = +3
Query: 3 TRVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 182
T VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 325 TGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDE 384
Query: 183 PGQIS---NGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 353
G+ S GY P T + +I D + K GD + +
Sbjct: 385 GGRHSPFFPGYRPQFYMRTTDVTGNVTKIMNDKD--------EEAKMCMPGDRVKMVVEL 436
Query: 354 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 458
+P+ E RFA+R+ +TV GVI +
Sbjct: 437 IQPVACEQGM------RFAIREGGKTVGAGVINTI 465
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 35.5 bits (78), Expect = 0.030
Identities = 38/152 (25%), Positives = 62/152 (40%)
Frame = +3
Query: 3 TRVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 182
T VEM + L GDNVG ++ + +++RG V K + F A++ VL
Sbjct: 316 TGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTK 373
Query: 183 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKP 362
+T L ++ + A++ KV D + + GD P
Sbjct: 374 --DEGGRHTAFLSNYSPQFYFRTADVTGKV------VLPDGVEMVMPGDNVTAGFELISP 425
Query: 363 LCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 458
+ +E P RFA+R+ +TV GV+ V
Sbjct: 426 VPLE------PGQRFALREGGRTVGAGVVSKV 451
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 395 GWEFL-EGLHTQGLGGNQVDNGGITRFNGF 309
G E+L EG + GGN +DN G+T +N F
Sbjct: 365 GMEYLFEGCSSITEGGNSMDNSGVTEYNLF 394
>05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152
Length = 265
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 331 PPLSTWFPPSPCVW 372
PP+S+ PPSPC W
Sbjct: 175 PPISSGMPPSPCEW 188
>02_03_0125 +
15529391-15529495,15530066-15530226,15530315-15530570,
15531360-15531374,15533608-15533967
Length = 298
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 434 RRRCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSS 547
RRRC+K L+ R W++ C G+ V + N++
Sbjct: 102 RRRCSKSVALRDLRLWEASTMCALLSVGERVRRSSNTA 139
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 189 QISNG 203
+I G
Sbjct: 170 EIRRG 174
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 158 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 244
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -2
Query: 331 ASPDLMDLGLSSVDLPVRRSTFSL 260
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 256 KSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSP 378
K+ K +N+ TTL L++ M P+S+W + +P
Sbjct: 832 KANLKDLFAQINKLHTTLRSLSIRMKPVSSWGSTEAVLMTP 872
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 253 PKSKRKSTVVLVNQQRTTLNPLNLVMP 333
P+ R+S + Q TT++P NLV+P
Sbjct: 103 PRRNRRSPALRAAFQETTISPANLVLP 129
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 166 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 23
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 241 PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTW---FPPSPCVWSPSRNSHPSVVSP 411
P L S R + + + +P + PP +W PPS +P R S PS S
Sbjct: 153 PIRLSPSPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTPPSAKTLTPPRRS-PSPAS- 210
Query: 412 CVT*GRRSPS 441
+T RRSPS
Sbjct: 211 TLTPPRRSPS 220
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 252 QICRLCGLCGNPIQVCI 202
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 96 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 206
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>03_05_0896 - 28592658-28593331,28594069-28595455
Length = 686
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 234 HIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 395
H+ + EIK+ +R G+ + ++++GD SKP E F P
Sbjct: 638 HVVLRIEEIKKSSERLEGRDPQQQASNLEAGDDQ-----TSKPESAEGLNPFAP 686
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,222,179
Number of Sequences: 37544
Number of extensions: 440390
Number of successful extensions: 1545
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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