Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F12
(569 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 304 4e-85
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 299 2e-83
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 232 2e-63
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 87 9e-20
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 27 0.099
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.2
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 2.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 6.5
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 8.6
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 8.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 304 bits (746), Expect = 4e-85
Identities = 141/152 (92%), Positives = 147/152 (96%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPG
Sbjct: 292 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 351
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLC 368
QISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSKP+C
Sbjct: 352 QISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMC 411
Query: 369 VESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 464
E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 412 AEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 299 bits (733), Expect = 2e-83
Identities = 138/152 (90%), Positives = 146/152 (96%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPG
Sbjct: 292 VEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPG 351
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLC 368
QISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+KP+C
Sbjct: 352 QISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMC 411
Query: 369 VESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 464
VE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 412 VEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 232 bits (567), Expect = 2e-63
Identities = 107/117 (91%), Positives = 112/117 (95%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
VEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPG
Sbjct: 3 VEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPG 62
Query: 189 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 359
QISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 63 QISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 87.4 bits (207), Expect = 9e-20
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 9 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 128
VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 235 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 27.5 bits (58), Expect = 0.099
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 434 RRRCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVN 541
R RC+ ++ GS+ WQ +SC + E ++V+
Sbjct: 54 RGRCSSYLQVSGSKIWQMERSCMCCQESGEREASVS 89
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 125 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 235
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 2.8
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 458 HSLYYTDGDRLPHVTHGETTEGWEFLEG-LHTQGLGGNQVDNG 333
H LYY D ++ + + E +E + L+TQ G NG
Sbjct: 276 HGLYYVDTEQFSNPQYEENNVQYEGSQDILNTQSFGKVVSKNG 318
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 4.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 81 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 188
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 383 LEGLHTQGLGGNQVDNGGITRFNGFRVV 300
L LHT L N++ G FNG V+
Sbjct: 382 LYNLHTLELSDNKLRTVGAQLFNGLFVL 409
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 268 KSTVVLVNQQRTTLNPLNLVM 330
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 52 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 174
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 303 NPKSIKSGDAAIVNLVPSKPLC 368
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 303 NPKSIKSGDAAIVNLVPSKPLC 368
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,395
Number of Sequences: 438
Number of extensions: 4111
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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