Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F11
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L34041-1|AAA92863.1|  349|Homo sapiens L-glycerol-3-phosphate:NA...    42   0.001
BC032234-1|AAH32234.1|  349|Homo sapiens glycerol-3-phosphate de...    42   0.001
D42047-1|BAA07648.1|  411|Homo sapiens KIAA0089 protein.               42   0.002
BC028726-1|AAH28726.1|  351|Homo sapiens glycerol-3-phosphate de...    42   0.002
BC006168-1|AAH06168.1|  259|Homo sapiens GPD1L protein protein.        42   0.002
AK027783-1|BAB55365.1|  403|Homo sapiens protein ( Homo sapiens ...    30   5.4  

>L34041-1|AAA92863.1|  349|Homo sapiens L-glycerol-3-phosphate:NAD
           oxidoreductase protein.
          Length = 349

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +3

Query: 6   RFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 101
           +FPLF AV+++C       +FI C+++HPEHM
Sbjct: 318 KFPLFMAVYKVCYEGQPVGEFIHCLQNHPEHM 349


>BC032234-1|AAH32234.1|  349|Homo sapiens glycerol-3-phosphate
           dehydrogenase 1 (soluble) protein.
          Length = 349

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +3

Query: 6   RFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 101
           +FPLF AV+++C       +FI C+++HPEHM
Sbjct: 318 KFPLFMAVYKVCYEGQPVGEFIHCLQNHPEHM 349


>D42047-1|BAA07648.1|  411|Homo sapiens KIAA0089 protein.
          Length = 411

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +3

Query: 6   RFPLFTAVFRICRGELKPNDFIDCIRSHPEH 98
           +FPLFTAV++IC       + + C++SHPEH
Sbjct: 380 KFPLFTAVYQICYESRPVQEMLSCLQSHPEH 410


>BC028726-1|AAH28726.1|  351|Homo sapiens glycerol-3-phosphate
           dehydrogenase 1-like protein.
          Length = 351

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +3

Query: 6   RFPLFTAVFRICRGELKPNDFIDCIRSHPEH 98
           +FPLFTAV++IC       + + C++SHPEH
Sbjct: 320 KFPLFTAVYQICYESRPVQEMLSCLQSHPEH 350


>BC006168-1|AAH06168.1|  259|Homo sapiens GPD1L protein protein.
          Length = 259

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +3

Query: 6   RFPLFTAVFRICRGELKPNDFIDCIRSHPEH 98
           +FPLFTAV++IC       + + C++SHPEH
Sbjct: 228 KFPLFTAVYQICYESRPVQEMLSCLQSHPEH 258


>AK027783-1|BAB55365.1|  403|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14877 fis, clone PLACE1003044. ).
          Length = 403

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +3

Query: 360 VNLCNIES-QLKETLLGSYKSLVPRHP*SLWRNLSQVINVII 482
           V  CN++  +LKE  + +++S V R P  ++ ++S +IN+ +
Sbjct: 104 VKFCNVDDDELKEYCIQAFESFVRRCPKEVYPHVSTIINICL 145


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,769,239
Number of Sequences: 237096
Number of extensions: 1549296
Number of successful extensions: 2262
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2262
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)