Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F10
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.0  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   6.6  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   8.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -1

Query: 434 VVMRPTSLHNEWQVSTKSVGECVK*DANKR 345
           ++ +P SL +EW+ ST ++    + D+NK+
Sbjct: 159 LLKKPPSLDSEWKSSTSTIQLIEQLDSNKQ 188


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 255 SSNGHERMVTMATATEILAGTVFSRGWIQWPL 350
           S++ +E+++T +TA+       F+R   QW L
Sbjct: 503 SNDSNEQIITFSTASTEQMTVTFNRPLNQWTL 534


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 255 SSNGHERMVTMATATEILAGTVFSRGWIQWPL 350
           S++ +E+++T +TA+       F+R   QW L
Sbjct: 504 SNDSNEQIITFSTASTEQMTVTFNRPLNQWTL 535


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 305 DLGGGSHCNHSFMAIAATSIKGDYRLN 225
           D  GGS  + +  A AAT + G +  N
Sbjct: 155 DASGGSPVSRAGSAAAATGVPGSWNTN 181


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 349 LFASHFTHSPTLLVDTCHSLCRLVGL 426
           LFA  + HS T  +   +++C + G+
Sbjct: 294 LFADLYVHSITQDIMVAYAICHMAGM 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,661
Number of Sequences: 2352
Number of extensions: 12265
Number of successful extensions: 66
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)