Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F09
         (510 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    26   0.64 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    26   0.64 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    26   0.64 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.9  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 198 TPSTRYISRADSNGFSNDTIPLII 127
           TP  R ++R +SN  +ND  PL++
Sbjct: 145 TPRRRGLTRRESNSDANDNDPLVV 168


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 198 TPSTRYISRADSNGFSNDTIPLII 127
           TP  R ++R +SN  +ND  PL++
Sbjct: 145 TPRRRGLTRRESNSDANDNDPLVV 168


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 198 TPSTRYISRADSNGFSNDTIPLII 127
           TP  R ++R +SN  +ND  PL++
Sbjct: 31  TPRRRGLTRRESNSDANDNDPLVV 54


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 12/49 (24%), Positives = 18/49 (36%)
 Frame = -1

Query: 282  GETAGAAHRGANNRW*RAKYTAATNRETTPSTRYISRADSNGFSNDTIP 136
            G   GA   G +     + +   +N     S  Y     +NG S  T+P
Sbjct: 1214 GNDRGAGEGGGSRSVPPSTFAQNSNASNCSSVNYNKLKANNGLSTTTVP 1262


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 309 IQTEPQTGHILRCGCTTKNDLERVISV 389
           ++T   TGH+  C     NDL++  +V
Sbjct: 529 LKTAGATGHLSCCNSLFLNDLQQAAAV 555


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,436
Number of Sequences: 2352
Number of extensions: 12641
Number of successful extensions: 75
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)