Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F09
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical ... 31 0.37
AL021447-5|CAA16268.4| 312|Caenorhabditis elegans Hypothetical ... 29 2.6
U40028-9|AAA81120.1| 256|Caenorhabditis elegans Serpentine rece... 28 3.4
Z50739-1|CAA90604.1| 400|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z49069-3|CAA88866.4| 346|Caenorhabditis elegans Hypothetical pr... 27 6.0
U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical pr... 27 6.0
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 6.0
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 6.0
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 6.0
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 6.0
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 6.0
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 6.0
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 6.0
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 6.0
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 6.0
AC024794-5|AAK68500.1| 320|Caenorhabditis elegans Hypothetical ... 27 6.0
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical ... 27 7.9
>AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical
protein T08E11.8 protein.
Length = 534
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 255 GANNRW*RAKYTAATNRETTPSTRYISRADSNGFSNDTIPLI 130
G NN T T+R PS Y +AD N FS+D I L+
Sbjct: 265 GRNNDTTILYNTPGTDRSNIPSLNYKYKADINSFSDDLIQLL 306
>AL021447-5|CAA16268.4| 312|Caenorhabditis elegans Hypothetical
protein F19B2.3 protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 382 FPLLIFFYLSLS----CFKPFKFYITISNVTSNYVCSITNQIPSNL 507
FP+L +YLS CF PF Y S + SNY S+TN + + +
Sbjct: 89 FPMLYDYYLSFKVPSECF-PFAPY---SKIVSNYYSSMTNAVVTGM 130
>U40028-9|AAA81120.1| 256|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 39 protein.
Length = 256
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 111 PMQKCAITGSACPVAVYLRGTKCLKYNMAVT---HTRPSC 1
P + +TG+ CPV Y G C++ M+ T H SC
Sbjct: 188 PSETTCMTGATCPVGQYCIGGICVQNPMSTTFACHNLISC 227
>Z50739-1|CAA90604.1| 400|Caenorhabditis elegans Hypothetical
protein F13D2.2 protein.
Length = 400
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 294 RCCGGETAGAAHRGANNRW*RAKYTAATNRETT 196
RCC E HR +NR RAK + T T+
Sbjct: 291 RCCAEELITKQHRKKSNRRMRAKESTTTTSSTS 323
>Z49069-3|CAA88866.4| 346|Caenorhabditis elegans Hypothetical
protein K12D12.4a protein.
Length = 346
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 122 LYTDRCKNVR*QAVLVLWLCTCAVL 48
LY C+NV + VL+L TC VL
Sbjct: 43 LYVSVCRNVGESLIFVLFLATCFVL 67
>U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical
protein C01B10.9 protein.
Length = 555
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 246 YWHRDVPPQRFHHHNTCCKV*IQTEPQTGHILRCGCT 356
+W +VP +R+H+ N+ I EPQ G + CT
Sbjct: 309 HWREEVP-ERWHYRNSSRIGKIVFEPQIGSSISFSCT 344
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2585 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2631
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2564 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2610
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2620 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2666
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2574 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2620
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2574 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2620
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2585 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2631
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2574 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2620
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2564 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2610
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 GSFPLLIFFYLSLSCFKPFK--FYITISNVTSNYVCSITNQIPSNLC 510
G L++ ++ S+ F F+ FY+ + V ++ +I++ IPS C
Sbjct: 2620 GLLALILLYFFSILGFLYFRHDFYLEVDPVENDSSATISSGIPSETC 2666
>AC024794-5|AAK68500.1| 320|Caenorhabditis elegans Hypothetical
protein Y48G1BM.8 protein.
Length = 320
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 225 YTAATNRETTPSTRYISRADSNGFSNDTIPLIIAPIHRPMQKCAITGSACPVAVYLRG 52
Y +N ++ S +I + S G S+D P +API ++ + G A+Y G
Sbjct: 46 YRHGSNTTSSDSDSFILNSGS-GSSDDETPPPVAPIFISLEDVLLNGQLIDFAIYPSG 102
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 351 TRIGEYVPFEAPFVFKPCNRCC 286
T + VPFEA F+ C RCC
Sbjct: 594 TDVKNVVPFEASEFFECCIRCC 615
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 351 TRIGEYVPFEAPFVFKPCNRCC 286
T + VPFEA F+ C RCC
Sbjct: 594 TDVKNVVPFEASEFFECCIRCC 615
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 351 TRIGEYVPFEAPFVFKPCNRCC 286
T + VPFEA F+ C RCC
Sbjct: 594 TDVKNVVPFEASEFFECCIRCC 615
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 351 TRIGEYVPFEAPFVFKPCNRCC 286
T + VPFEA F+ C RCC
Sbjct: 594 TDVKNVVPFEASEFFECCIRCC 615
>AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.5 protein.
Length = 367
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 400 FYLSLSCFKPFKFYITISNVTSNYVCSITNQIPSNL 507
F +S CF PF Y S + SNY S+TN + + +
Sbjct: 99 FEISFECF-PFASY---SKIVSNYYSSMTNAVVTGM 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,332,661
Number of Sequences: 27780
Number of extensions: 258166
Number of successful extensions: 698
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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