Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F08
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97010-5|AAK73903.1| 444|Caenorhabditis elegans Hypothetical pr... 72 2e-13
U97010-4|AAL65798.1| 438|Caenorhabditis elegans Hypothetical pr... 72 2e-13
U97010-6|AAL65797.1| 501|Caenorhabditis elegans Hypothetical pr... 71 3e-13
Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical pr... 31 0.42
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 29 1.7
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 29 1.7
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 27 5.1
U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 27 6.8
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 27 6.8
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 27 6.8
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 27 6.8
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription f... 27 6.8
U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell ... 27 6.8
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 27 6.8
AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein. 27 6.8
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.8
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 27 6.8
AF016435-3|AAB65879.1| 438|Caenorhabditis elegans Hypothetical ... 27 6.8
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 26 9.0
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 26 9.0
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 26 9.0
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 26 9.0
>U97010-5|AAK73903.1| 444|Caenorhabditis elegans Hypothetical
protein W08A12.1b protein.
Length = 444
Score = 71.7 bits (168), Expect = 2e-13
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +2
Query: 122 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWKVF 238
N+ + VYK+VLTGGPCGGKTT Q RL+TFFENLGWKVF
Sbjct: 42 NERKFKVYKIVLTGGPCGGKTTAQVRLATFFENLGWKVF 80
Score = 53.2 bits (122), Expect = 7e-08
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +1
Query: 250 ETATVLLSGGVKFADLTPDEAAKFQENLLKTMIQIENTFF-ELGMTSPRNCLI 405
ETAT+LL G VKF++L +++ FQ +LL TM QIENTFF + RN LI
Sbjct: 84 ETATILLGGRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLI 136
>U97010-4|AAL65798.1| 438|Caenorhabditis elegans Hypothetical
protein W08A12.1c protein.
Length = 438
Score = 71.7 bits (168), Expect = 2e-13
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +2
Query: 122 NQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWKVF 238
N+ + VYK+VLTGGPCGGKTT Q RL+TFFENLGWKVF
Sbjct: 36 NERKFKVYKIVLTGGPCGGKTTAQVRLATFFENLGWKVF 74
Score = 53.2 bits (122), Expect = 7e-08
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +1
Query: 250 ETATVLLSGGVKFADLTPDEAAKFQENLLKTMIQIENTFF-ELGMTSPRNCLI 405
ETAT+LL G VKF++L +++ FQ +LL TM QIENTFF + RN LI
Sbjct: 78 ETATILLGGRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLI 130
>U97010-6|AAL65797.1| 501|Caenorhabditis elegans Hypothetical
protein W08A12.1a protein.
Length = 501
Score = 70.9 bits (166), Expect = 3e-13
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +2
Query: 131 QKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWKVF 238
++ VYK+VLTGGPCGGKTT Q RL+TFFENLGWKVF
Sbjct: 102 ERKVYKIVLTGGPCGGKTTAQVRLATFFENLGWKVF 137
Score = 53.2 bits (122), Expect = 7e-08
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +1
Query: 250 ETATVLLSGGVKFADLTPDEAAKFQENLLKTMIQIENTFF-ELGMTSPRNCLI 405
ETAT+LL G VKF++L +++ FQ +LL TM QIENTFF + RN LI
Sbjct: 141 ETATILLGGRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLI 193
>Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical
protein H25P06.1 protein.
Length = 552
Score = 30.7 bits (66), Expect = 0.42
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 321 ELCRFIWCQICKFHTTTEEDGSRFTAHRNTFHPKFSKKVLSRDCPV 184
EL R + ++C+ GS+ RNTF K+ ++L DC V
Sbjct: 333 ELVRLVLERLCENKVLFNGIGSKMLRTRNTFPTKYISEILHDDCGV 378
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 110 SKNGNQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFEN 220
S ++N +YKL +GGP G K + R FEN
Sbjct: 1122 SSGDSRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN 1157
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 110 SKNGNQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFEN 220
S ++N +YKL +GGP G K + R FEN
Sbjct: 1122 SSGDSRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN 1157
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 110 SKNGNQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFEN 220
S ++N +YKL +GGP G K + R FEN
Sbjct: 1122 SSGDSRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN 1157
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 110 SKNGNQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFEN 220
S ++N +YKL +GGP G K + R FEN
Sbjct: 1122 SSGDSRNSDVIYKLTASGGP-GNKAESKFRQFNKFEN 1157
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 20 WLFIFYS-HFNINITLYLS*CNLILTFIFMRSKN 118
WLF+ S + + TLYL + +L ++F+R K+
Sbjct: 101 WLFVASSVETSFHYTLYLQFTSSVLLYVFLREKD 134
>U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical
protein T05E8.1 protein.
Length = 893
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 190 TVSTKHLLRKLRMEGVPVCRETATVLLSGGVKFADLTPDEAAKFQENLLK 339
TVS L+ +G + R+ +T LL+ G +L PD F++ L+
Sbjct: 64 TVSFGILVENQNKDGRIIVRDGSTELLNDGGSDIELLPDNGKNFEKRKLQ 113
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 189 PVVLPPQGPPVRT 151
PVV+PP PPVRT
Sbjct: 472 PVVIPPPPPPVRT 484
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 189 PVVLPPQGPPVRT 151
PVV+PP PPVRT
Sbjct: 652 PVVIPPPPPPVRT 664
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 189 PVVLPPQGPPVRT 151
PVV+PP PPVRT
Sbjct: 669 PVVIPPPPPPVRT 681
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 189 PVVLPPQGPPVRT 151
PVV+PP PPVRT
Sbjct: 724 PVVIPPPPPPVRT 736
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 60 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 93
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 60 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 93
>Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription
factor protein.
Length = 472
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 185 WFCLRKVLLLGPTCKPFSGFGCHF 114
W LR V+++ CKP+ + C F
Sbjct: 353 WNLLRHVIMIHSDCKPYKCWDCDF 376
>U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell
lineage protein 26 protein.
Length = 438
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 185 WFCLRKVLLLGPTCKPFSGFGCHF 114
W LR V+++ CKP+ + C F
Sbjct: 319 WNLLRHVIMIHSDCKPYKCWDCDF 342
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 189 PVVLPPQGPPVRT 151
PVV+PP PPVRT
Sbjct: 724 PVVIPPPPPPVRT 736
>AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein.
Length = 438
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 185 WFCLRKVLLLGPTCKPFSGFGCHF 114
W LR V+++ CKP+ + C F
Sbjct: 319 WNLLRHVIMIHSDCKPYKCWDCDF 342
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 46 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 79
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 233 PSILSFRRRCLVETVLWFCLRKVLLLGPTCKPFS 132
P I S R +CL E ++C+ V G TC+ S
Sbjct: 60 PKICSNRGKCLHENGNFYCICPVTHYGKTCEHVS 93
>AF016435-3|AAB65879.1| 438|Caenorhabditis elegans Hypothetical
protein F59D6.4 protein.
Length = 438
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 265 LLSGGVKFADLTPDEAAKFQENLLKTMIQIENTFFE 372
+L GG++ + TPD +A ++K I+I+N+ F+
Sbjct: 120 VLYGGLQIFNKTPDLSALSNIEIIKGEIEIQNSNFQ 155
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -1
Query: 358 SQSGSLFLISFLGTLPLHLVSDLQISXXXXXXXXXXXGTPEHLPS*VFEEG 206
SQSG +F +GTLP H +S TP +PS F EG
Sbjct: 199 SQSGHIFNAHEMGTLPRHGTLPRGVSPSPGAYNDTMRRTP-IMPSISFSEG 248
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -1
Query: 358 SQSGSLFLISFLGTLPLHLVSDLQISXXXXXXXXXXXGTPEHLPS*VFEEG 206
SQSG +F +GTLP H +S TP +PS F EG
Sbjct: 199 SQSGHIFNAHEMGTLPRHGTLPRGVSPSPGAYNDTMRRTP-IMPSISFSEG 248
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 89 LTFIFMRSKNGNQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWK 232
+T+ +S N N+ + + L G P GKT +L + +G K
Sbjct: 12 MTYFVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIK 59
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 89 LTFIFMRSKNGNQNQKTVYKLVLTGGPCGGKTTGQSRLSTFFENLGWK 232
+T+ +S N N+ + + L G P GKT +L + +G K
Sbjct: 18 MTYFVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIK 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,936,301
Number of Sequences: 27780
Number of extensions: 210927
Number of successful extensions: 675
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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