Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F07
         (453 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.7  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    22   8.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    22   8.8  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    22   8.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 212  GWSKIALRIT*TLPKYLIKIRLRIKNNQSRIYETRAQPRAN 334
            GW   + R T  LP+    ++ R++N  S +   ++Q  AN
Sbjct: 3222 GWGSSSSRTTKDLPEIRKYLQKRLENGLSDLELLQSQAVAN 3262


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 273 LIFIKYLGSVQVIRNAILDHPPPARTPCVT 184
           L+ + +L SV ++       PPP    C T
Sbjct: 10  LLLLAWLASVTILGVEAYATPPPTTANCTT 39


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 93  STGKSLLYLCYCLNRSNNVHYH 28
           S+  +L+     +N  NN+HYH
Sbjct: 894 SSSSNLVAAGMVINDENNLHYH 915


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 373 ICVHSGHTYYTLAVCSRLRPR 311
           I VH+   Y+ LAV   LRP+
Sbjct: 180 ITVHAFGAYFGLAVSFMLRPK 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,440
Number of Sequences: 2352
Number of extensions: 7486
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)