Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F06
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   5.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.5  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   7.5  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   7.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   7.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   9.9  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 123 TQYPSTRVTPYRTP 164
           TQY   + TPY TP
Sbjct: 341 TQYVRHKNTPYHTP 354


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +3

Query: 360  TNSPTVKSSQSETKGSVAQRLSSSP 434
            +N+P++ + + ++   V QR+S +P
Sbjct: 1406 SNNPSISAFRKKSLAYVQQRMSIAP 1430


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +3

Query: 360  TNSPTVKSSQSETKGSVAQRLSSSP 434
            +N+P++ + + ++   V QR+S +P
Sbjct: 1406 SNNPSISAFRKKSLAYVQQRMSIAP 1430


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 305 DFEQEMATAASSSSLEKSYELPDGQ 379
           DF     ++ +S  L+ SY+ P  Q
Sbjct: 62  DFHSSSPSSDTSQDLQHSYQSPQTQ 86


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 173 DAGWRAVGRNPRRWVLCG 120
           +AGW  +     ++V+CG
Sbjct: 312 NAGWSFLQEGANKFVICG 329


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 275 CRERFHARRW 246
           CR +FH  RW
Sbjct: 31  CRYKFHNSRW 40


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 275 CRERFHARRW 246
           CR +FH  RW
Sbjct: 31  CRYKFHNSRW 40


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 114 VYPTQYPSTRVTPY 155
           VY   YPST   PY
Sbjct: 9   VYGAPYPSTDQNPY 22


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 173 DAGWRAVGRNPRRWVLCGI 117
           D GW  V    RR  LC +
Sbjct: 713 DLGWVEVWERKRRQYLCPV 731


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,566
Number of Sequences: 336
Number of extensions: 2259
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)