Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F06
         (469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         319   3e-89
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         319   3e-89
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         319   3e-89
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          295   7e-82
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   1.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   4.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   4.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   4.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   5.3  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   5.3  
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           22   9.3  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  319 bits (784), Expect = 3e-89
 Identities = 153/154 (99%), Positives = 154/154 (100%)
 Frame = +2

Query: 8   VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
           +FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 183

Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
           RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243

Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
           PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 277


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  319 bits (784), Expect = 3e-89
 Identities = 153/154 (99%), Positives = 154/154 (100%)
 Frame = +2

Query: 8   VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
           +FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 183

Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
           RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243

Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
           PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 277


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  319 bits (784), Expect = 3e-89
 Identities = 153/154 (99%), Positives = 154/154 (100%)
 Frame = +2

Query: 8   VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
           +FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 183

Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
           RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243

Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
           PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 277


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  295 bits (723), Expect = 7e-82
 Identities = 141/154 (91%), Positives = 147/154 (95%)
 Frame = +2

Query: 8   VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
           +FETF  PA+YVAIQAVLSLYASGRTTG+VLDSGDGVSHTVPIYEGYALPHAILR+DLAG
Sbjct: 124 MFETFAAPAVYVAIQAVLSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAG 183

Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
           RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM  AA+SSS EKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQAAAASSSSEKSYEL 243

Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
           PDGQVITIGNERFR PEALFQPSFLGME+ GIHE
Sbjct: 244 PDGQVITIGNERFRAPEALFQPSFLGMESTGIHE 277


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  VVPPVSCWIPAMVYPTQYPSTRVTP 152
           +  PV+   PA+  PT+ P TR +P
Sbjct: 476 IAHPVTVPRPAITAPTRVPQTRTSP 500


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 158 AVGRNPRRWVLCGIHHRRNPARYR 87
           A G   RRW   G   RR P  YR
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYR 133


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 158 AVGRNPRRWVLCGIHHRRNPARYR 87
           A G   RRW   G   RR P  YR
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYR 133


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 245 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL-EKSYELPD--GQVITIGNER 403
           T   R ++    E+  Y +    Q  ++++SSSS  + SYE     G ++ I  +R
Sbjct: 93  TKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSFQQSSYESESGAGSIVQISPQR 148


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 162 ACGRA*PS*MGTVWDTPSPESSTIPVVRP 76
           A G+A  + +GT   TP+  ++  PV RP
Sbjct: 13  ATGKAASAVIGTTQSTPATAAAPQPVQRP 41


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 162 ACGRA*PS*MGTVWDTPSPESSTIPVVRP 76
           A G+A  + +GT   TP+  ++  PV RP
Sbjct: 13  ATGKAASAVIGTTQSTPATAAAPQPVQRP 41


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 298 CARLRAGDGHRCLQQLPR 351
           CA+ R    HR +Q LPR
Sbjct: 19  CAQARVALKHRSVQALPR 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,130
Number of Sequences: 2352
Number of extensions: 10058
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)