Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F06
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 313 5e-86
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 313 5e-86
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 312 6e-86
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 312 6e-86
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 312 6e-86
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 312 6e-86
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 312 1e-85
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 312 1e-85
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 312 1e-85
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 312 1e-85
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 293 4e-80
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 185 1e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 175 1e-44
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 105 2e-23
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 71 4e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 68 4e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 57 5e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 57 5e-09
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.18
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 30 0.95
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 3.8
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 5.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 313 bits (768), Expect = 5e-86
Identities = 149/154 (96%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 313 bits (768), Expect = 5e-86
Identities = 149/154 (96%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 312 bits (767), Expect = 6e-86
Identities = 148/154 (96%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 312 bits (767), Expect = 6e-86
Identities = 148/154 (96%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 80 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 139
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 140 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 199
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 200 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 233
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 312 bits (767), Expect = 6e-86
Identities = 148/154 (96%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 110 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 169
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 170 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 229
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 230 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 263
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 312 bits (767), Expect = 6e-86
Identities = 148/154 (96%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 312 bits (765), Expect = 1e-85
Identities = 147/154 (95%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 312 bits (765), Expect = 1e-85
Identities = 147/154 (95%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 312 bits (765), Expect = 1e-85
Identities = 147/154 (95%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 312 bits (765), Expect = 1e-85
Identities = 147/154 (95%), Positives = 153/154 (99%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 293 bits (719), Expect = 4e-80
Identities = 138/154 (89%), Positives = 146/154 (94%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAG
Sbjct: 123 MFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAG 182
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AASSSSLEKSYEL
Sbjct: 183 RDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYEL 242
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDGQVITIGNERFRCPE LFQP+F+GME GIHE
Sbjct: 243 PDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHE 276
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 185 bits (451), Expect = 1e-47
Identities = 83/154 (53%), Positives = 112/154 (72%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AG
Sbjct: 127 MFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAG 186
Query: 188 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 367
RD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A ++ L + Y L
Sbjct: 187 RDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTL 246
Query: 368 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 469
PDG+VI +G ERF PE LFQP + +E G+ E
Sbjct: 247 PDGRVIRLGGERFEAPEILFQPHLINVEKAGLSE 280
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 175 bits (426), Expect = 1e-44
Identities = 84/151 (55%), Positives = 108/151 (71%)
Frame = +2
Query: 11 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 190
FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGR
Sbjct: 128 FETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGR 187
Query: 191 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 370
D+T+YL +L GY F + E EIVR++KE CY+ALD T ++S++ SY LP
Sbjct: 188 DVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALP 242
Query: 371 DGQVITIGNERFRCPEALFQPSFLGMEACGI 463
D I I N FR PE LF+P +G E G+
Sbjct: 243 DTTKIEISNSLFRAPEVLFKPDLIGTEWPGM 273
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 105 bits (251), Expect = 2e-23
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 14/162 (8%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHA 163
+FE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY +
Sbjct: 137 MFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSC 196
Query: 164 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT-AASS 340
I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E +
Sbjct: 197 IKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDA 256
Query: 341 SSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME 451
+ ++Y+ + + +G ERF PE F P F E
Sbjct: 257 AKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPE 298
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 70.9 bits (166), Expect = 4e-13
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Frame = +2
Query: 50 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 229
Q L LYA TTG+V+D G+ V+ VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERVN-IVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAH 368
Query: 230 G---YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITI 391
Y+F + E+ I+R E+ YV D+++E + + SL+ P Q I
Sbjct: 369 NKGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDI 428
Query: 392 GNERFRCPEALFQPSFLGMEACGIHE 469
N RF C E LF+P G++ G+H+
Sbjct: 429 DNSRFLCTEGLFKPKKWGLDTKGLHQ 454
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 67.7 bits (158), Expect = 4e-12
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = +2
Query: 8 VFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 187
+FE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G
Sbjct: 146 MFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGG 205
Query: 188 RDLTDYLMKILTER 229
+T+ L ++L ++
Sbjct: 206 DLITEQLAQMLDQQ 219
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 359 YELPDGQVITIGNERFRCPEALFQPSFLGME 451
Y P+G G ER + PE LF +L E
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAE 323
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 57.2 bits (132), Expect = 5e-09
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Frame = +2
Query: 92 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 271
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 272 DIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------------I 385
+ KE LC+V+ +F++ M A + ++ K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 386 TIGNERFRCPEALFQPSFLGMEACGIHE 469
+G ERF PE LF PS + ++ CG+ E
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAE 291
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 57.2 bits (132), Expect = 5e-09
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Frame = +2
Query: 92 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 271
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 272 DIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------------I 385
+ KE LC+V+ +F++ M A + ++ K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 386 TIGNERFRCPEALFQPSFLGMEACGIHE 469
+G ERF PE LF PS + ++ CG+ E
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAE 291
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.18
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 117 TPSPESSTIPVVRPDAYSESTAWIATYMAGVL 22
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 0.95
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 69 TRPVVPPVS-CWIPAMVYPTQYPSTRVTPYRTPSCV 173
TRP P++ W P +VY Q+P R+ P +P C+
Sbjct: 43 TRPRKSPLNENWKPDVVYLYQFPRARLLPNLSPFCM 78
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +3
Query: 30 PPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PV 188
PPC P C P PP +P P P+ P P C+ P+
Sbjct: 27 PPCP---EPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPM 76
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 82 YHRYRAGFRRWCIP 123
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,947,064
Number of Sequences: 27780
Number of extensions: 214054
Number of successful extensions: 804
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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