Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F05
         (390 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031054-1|AAH31054.2|  635|Homo sapiens OSGIN2 protein protein.       29   4.0  
AF069291-1|AAC62231.1|  505|Homo sapiens hT41 protein.                 29   4.0  
AF061326-1|AAD18134.1|  505|Homo sapiens T41p protein.                 29   4.0  
BC008115-1|AAH08115.1|  436|Homo sapiens C1orf103 protein protein.     29   5.3  
AY190122-1|AAO43631.1|  739|Homo sapiens receptor-interacting fa...    29   5.3  
AL360270-1|CAI17128.1|  769|Homo sapiens chromosome 1 open readi...    29   5.3  
AK002131-1|BAA92097.1|  343|Homo sapiens protein ( Homo sapiens ...    29   5.3  

>BC031054-1|AAH31054.2|  635|Homo sapiens OSGIN2 protein protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 226 VIGTFQNSCSGSSIIFTSLHMCILA---KLYHVKCHQNYIIYSQILQD 92
           VI  F+   +  S+IF  L   +     K+YH+ C Q+Y + S +L D
Sbjct: 457 VIHVFRRRVTDPSLIFKQLPKKLYPEYHKVYHMMCTQSYSVDSNLLSD 504


>AF069291-1|AAC62231.1|  505|Homo sapiens hT41 protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 226 VIGTFQNSCSGSSIIFTSLHMCILA---KLYHVKCHQNYIIYSQILQD 92
           VI  F+   +  S+IF  L   +     K+YH+ C Q+Y + S +L D
Sbjct: 327 VIHVFRRRVTDPSLIFKQLPKKLYPEYHKVYHMMCTQSYSVDSNLLSD 374


>AF061326-1|AAD18134.1|  505|Homo sapiens T41p protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 226 VIGTFQNSCSGSSIIFTSLHMCILA---KLYHVKCHQNYIIYSQILQD 92
           VI  F+   +  S+IF  L   +     K+YH+ C Q+Y + S +L D
Sbjct: 327 VIHVFRRRVTDPSLIFKQLPKKLYPEYHKVYHMMCTQSYSVDSNLLSD 374


>BC008115-1|AAH08115.1|  436|Homo sapiens C1orf103 protein protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -2

Query: 146 ISRKMPPKLHNI*SNTAR**IENQDDNMTNQNRANKRTNVKID 18
           + R   PK+HN  ++T+    + ++D   +Q R+NK  ++K D
Sbjct: 192 VFRDQEPKIHNEMASTSDKGAQGRNDKKDSQGRSNKALHLKSD 234


>AY190122-1|AAO43631.1|  739|Homo sapiens receptor-interacting
           factor 1 protein.
          Length = 739

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -2

Query: 146 ISRKMPPKLHNI*SNTAR**IENQDDNMTNQNRANKRTNVKID 18
           + R   PK+HN  ++T+    + ++D   +Q R+NK  ++K D
Sbjct: 495 VFRDQEPKIHNEMASTSDKGAQGRNDKKDSQGRSNKALHLKSD 537


>AL360270-1|CAI17128.1|  769|Homo sapiens chromosome 1 open reading
           frame 103 protein.
          Length = 769

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -2

Query: 146 ISRKMPPKLHNI*SNTAR**IENQDDNMTNQNRANKRTNVKID 18
           + R   PK+HN  ++T+    + ++D   +Q R+NK  ++K D
Sbjct: 525 VFRDQEPKIHNEMASTSDKGAQGRNDKKDSQGRSNKALHLKSD 567


>AK002131-1|BAA92097.1|  343|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11269 fis, clone PLACE1009190. ).
          Length = 343

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -2

Query: 146 ISRKMPPKLHNI*SNTAR**IENQDDNMTNQNRANKRTNVKID 18
           + R   PK+HN  ++T+    + ++D   +Q R+NK  ++K D
Sbjct: 192 VFRDQEPKIHNEMASTSDKGAQGRNDKKDSQGRSNKALHLKSD 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,239,002
Number of Sequences: 237096
Number of extensions: 1058896
Number of successful extensions: 1752
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1752
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)