Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_F05
(390 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20894-1|AAA76834.1| 1767|Drosophila melanogaster receptor prote... 31 0.40
AY094714-1|AAM11067.1| 1064|Drosophila melanogaster GH15539p pro... 31 0.40
AE014298-696|AAN09133.1| 1607|Drosophila melanogaster CG6899-PB,... 31 0.40
AE014298-695|AAF45998.1| 1767|Drosophila melanogaster CG6899-PA,... 31 0.40
BT004474-1|AAO42638.1| 1631|Drosophila melanogaster RE52018p pro... 30 0.93
M80538-1|AAA28952.1| 1558|Drosophila melanogaster receptor-linke... 30 1.2
M80465-1|AAA28484.1| 1631|Drosophila melanogaster protein-tyrosi... 30 1.2
AE014298-1657|AAF48072.3| 1631|Drosophila melanogaster CG1817-PB... 30 1.2
AE014298-1656|AAS65320.1| 1962|Drosophila melanogaster CG1817-PD... 30 1.2
AE014298-1655|AAS65319.1| 1962|Drosophila melanogaster CG1817-PA... 30 1.2
AY058778-1|AAL14007.1| 377|Drosophila melanogaster SD06579p pro... 27 8.7
AJ133649-1|CAB38634.1| 377|Drosophila melanogaster actin relate... 27 8.7
AE014134-2408|AAN10852.1| 377|Drosophila melanogaster CG8978-PB... 27 8.7
AE014134-2407|AAF53339.1| 377|Drosophila melanogaster CG8978-PA... 27 8.7
>L20894-1|AAA76834.1| 1767|Drosophila melanogaster receptor protein
tyrosine phosphataseprotein.
Length = 1767
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 6/25 (24%)
Frame = -2
Query: 224 DWDISEFML------RVINHFHFTT 168
DW ISEFM+ R++ HFHFTT
Sbjct: 1466 DWSISEFMVSRNCESRIMRHFHFTT 1490
>AY094714-1|AAM11067.1| 1064|Drosophila melanogaster GH15539p
protein.
Length = 1064
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 6/25 (24%)
Frame = -2
Query: 224 DWDISEFML------RVINHFHFTT 168
DW ISEFM+ R++ HFHFTT
Sbjct: 918 DWSISEFMVSRNCESRIMRHFHFTT 942
>AE014298-696|AAN09133.1| 1607|Drosophila melanogaster CG6899-PB,
isoform B protein.
Length = 1607
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 6/25 (24%)
Frame = -2
Query: 224 DWDISEFML------RVINHFHFTT 168
DW ISEFM+ R++ HFHFTT
Sbjct: 1466 DWSISEFMVSRNCESRIMRHFHFTT 1490
>AE014298-695|AAF45998.1| 1767|Drosophila melanogaster CG6899-PA,
isoform A protein.
Length = 1767
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 6/25 (24%)
Frame = -2
Query: 224 DWDISEFML------RVINHFHFTT 168
DW ISEFM+ R++ HFHFTT
Sbjct: 1466 DWSISEFMVSRNCESRIMRHFHFTT 1490
>BT004474-1|AAO42638.1| 1631|Drosophila melanogaster RE52018p protein.
Length = 1631
Score = 30.3 bits (65), Expect = 0.93
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = -2
Query: 269 GGNKVAAFCYNHTESDWDISEFML------RVINHFHFTT 168
G KV +H +DW ++EFML R++ HFHFTT
Sbjct: 1395 GDIKVQILSDSHY-ADWVMTEFMLCRGSEQRILRHFHFTT 1433
>M80538-1|AAA28952.1| 1558|Drosophila melanogaster receptor-linked
protein tyrosinephosphatase protein.
Length = 1558
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 6/26 (23%)
Frame = -2
Query: 227 SDWDISEFML------RVINHFHFTT 168
+DW ++EFML R++ HFHFTT
Sbjct: 1408 ADWVMTEFMLCRGSEQRILRHFHFTT 1433
>M80465-1|AAA28484.1| 1631|Drosophila melanogaster protein-tyrosine
phosphatase protein.
Length = 1631
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 6/26 (23%)
Frame = -2
Query: 227 SDWDISEFML------RVINHFHFTT 168
+DW ++EFML R++ HFHFTT
Sbjct: 1408 ADWVMTEFMLCRGSEQRILRHFHFTT 1433
>AE014298-1657|AAF48072.3| 1631|Drosophila melanogaster CG1817-PB,
isoform B protein.
Length = 1631
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 6/26 (23%)
Frame = -2
Query: 227 SDWDISEFML------RVINHFHFTT 168
+DW ++EFML R++ HFHFTT
Sbjct: 1408 ADWVMTEFMLCRGSEQRILRHFHFTT 1433
>AE014298-1656|AAS65320.1| 1962|Drosophila melanogaster CG1817-PD,
isoform D protein.
Length = 1962
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 6/26 (23%)
Frame = -2
Query: 227 SDWDISEFML------RVINHFHFTT 168
+DW ++EFML R++ HFHFTT
Sbjct: 1408 ADWVMTEFMLCRGSEQRILRHFHFTT 1433
>AE014298-1655|AAS65319.1| 1962|Drosophila melanogaster CG1817-PA,
isoform A protein.
Length = 1962
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 6/26 (23%)
Frame = -2
Query: 227 SDWDISEFML------RVINHFHFTT 168
+DW ++EFML R++ HFHFTT
Sbjct: 1408 ADWVMTEFMLCRGSEQRILRHFHFTT 1433
>AY058778-1|AAL14007.1| 377|Drosophila melanogaster SD06579p
protein.
Length = 377
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = -2
Query: 278 SINGGNKVAAFCYNHTESDWDISEFMLRVINHFHFTTHVHPS 153
++ G ++ + CY +E+DW +S+ + + I + HP+
Sbjct: 116 AVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPN 157
>AJ133649-1|CAB38634.1| 377|Drosophila melanogaster actin related
complex p41 subunit protein.
Length = 377
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = -2
Query: 278 SINGGNKVAAFCYNHTESDWDISEFMLRVINHFHFTTHVHPS 153
++ G ++ + CY +E+DW +S+ + + I + HP+
Sbjct: 116 AVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPN 157
>AE014134-2408|AAN10852.1| 377|Drosophila melanogaster CG8978-PB,
isoform B protein.
Length = 377
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = -2
Query: 278 SINGGNKVAAFCYNHTESDWDISEFMLRVINHFHFTTHVHPS 153
++ G ++ + CY +E+DW +S+ + + I + HP+
Sbjct: 116 AVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPN 157
>AE014134-2407|AAF53339.1| 377|Drosophila melanogaster CG8978-PA,
isoform A protein.
Length = 377
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = -2
Query: 278 SINGGNKVAAFCYNHTESDWDISEFMLRVINHFHFTTHVHPS 153
++ G ++ + CY +E+DW +S+ + + I + HP+
Sbjct: 116 AVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPN 157
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,147
Number of Sequences: 53049
Number of extensions: 339387
Number of successful extensions: 736
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -