Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F03
         (512 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047900-1|AAH47900.1|  463|Homo sapiens BRDT protein protein.         30   5.5  
BC070149-1|AAH70149.1|  617|Homo sapiens solute carrier family 2...    29   9.5  
AY046419-1|AAL02327.1|  617|Homo sapiens glucose transporter pro...    29   9.5  
AL449363-1|CAI17977.1|  617|Homo sapiens solute carrier family 2...    29   9.5  
AL035699-6|CAD92514.2|  617|Homo sapiens solute carrier family 2...    29   9.5  

>BC047900-1|AAH47900.1|  463|Homo sapiens BRDT protein protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = -2

Query: 445 YLKHIIFIETYKHEITYSFDLQISRIFYQTPLNFIELRR*MQLTIKKKKQYNHIY 281
           YL+ ++  + +KH  ++ F   +  +  Q P  +  ++  M L   KK+  N  Y
Sbjct: 34  YLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYY 88


>BC070149-1|AAH70149.1|  617|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 12 protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 119 INNYGYMFKFSGWFYHVSLIYKYSVLQLILDYW 217
           I+NY +   F GW Y   L+    VLQ I  Y+
Sbjct: 184 ISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYF 216


>AY046419-1|AAL02327.1|  617|Homo sapiens glucose transporter
           protein 12 protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 119 INNYGYMFKFSGWFYHVSLIYKYSVLQLILDYW 217
           I+NY +   F GW Y   L+    VLQ I  Y+
Sbjct: 184 ISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYF 216


>AL449363-1|CAI17977.1|  617|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 12 protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 119 INNYGYMFKFSGWFYHVSLIYKYSVLQLILDYW 217
           I+NY +   F GW Y   L+    VLQ I  Y+
Sbjct: 184 ISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYF 216


>AL035699-6|CAD92514.2|  617|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 12 protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 119 INNYGYMFKFSGWFYHVSLIYKYSVLQLILDYW 217
           I+NY +   F GW Y   L+    VLQ I  Y+
Sbjct: 184 ISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYF 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,748,476
Number of Sequences: 237096
Number of extensions: 1252437
Number of successful extensions: 5598
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5598
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)