Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_F02
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   4.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   4.1  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   7.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   7.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   9.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    20   9.5  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 111 WDLIIYFKITC 79
           W LI+YF I C
Sbjct: 6   WWLILYFSIVC 16


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 368 YDRLFPYHNHLDPHNNRS 315
           YD L  + N +D H+NR+
Sbjct: 265 YDVLRSWRNLMDEHSNRT 282


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 200 KKRTLQKGYSDFKGILYIHYCHVNHKL 120
           +K+ L   + D+KGI+Y      N  +
Sbjct: 63  RKKVLLSVWWDYKGIVYFELLSPNRTI 89


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 401 RNIRNTQDLIYYDRLFPY 348
           + ++ T  ++Y+  LFPY
Sbjct: 226 KGVKWTGKVVYFTSLFPY 243


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 401 RNIRNTQDLIYYDRLFPY 348
           + ++ T  ++Y+  LFPY
Sbjct: 279 KGVKWTGKVVYFTSLFPY 296


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 120 LYKWDLIIYFKITC 79
           + +W L++Y  ITC
Sbjct: 1   MIRWLLLMYLGITC 14


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 200 KKRTLQKGYSDFKGILYIHYCHVNHKL 120
           +K+ L   + D+KGI+Y      N  +
Sbjct: 185 RKKVLLSVWWDYKGIVYFELLPPNRTI 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,830
Number of Sequences: 438
Number of extensions: 1431
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)