Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E19
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 33 0.21
06_01_0476 - 3388176-3389267 32 0.28
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 32 0.28
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 31 0.48
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 31 0.48
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 30 1.5
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 30 1.5
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 29 2.0
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 29 2.0
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 29 2.0
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 29 2.6
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 29 3.4
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 29 3.4
09_03_0128 + 12584166-12585320 28 4.5
08_02_0839 + 21693348-21694853 28 4.5
01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,717... 28 4.5
10_01_0006 + 74000-76441 28 6.0
02_05_1187 + 34820577-34820757,34820930-34820961,34832101-348321... 28 6.0
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 27 7.9
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 27 7.9
02_05_0713 + 31159574-31160764 27 7.9
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + S F Y PT+ D + + VD S L + DTAG E R
Sbjct: 22 MLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNR 69
>06_01_0476 - 3388176-3389267
Length = 363
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 335 GSAGIGWGRKKCFDCAVCVWMFHGE 409
G G G G K+ FDCAVC+ F G+
Sbjct: 117 GGGGAGGGAKEPFDCAVCLCEFAGD 141
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIE-DFYRTEIEVDNSPCVLEILDTAGTE 503
L +QF F +D TI +F I +DN P L+I DTAG E
Sbjct: 22 LLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQE 66
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + S F Y PT+ D + + VD + L + DTAG E R
Sbjct: 22 MLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNR 69
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + S F Y PT+ D + + VD + L + DTAG E R
Sbjct: 22 MLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNR 69
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + S F Y PT+ D + + VD + L + DTAG E R
Sbjct: 23 MLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSR 70
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + S F Y PT+ D + + VD++ L + DTAG E R
Sbjct: 24 MLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDTAGQEDYNR 71
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIE-DFYRTEIEVDNSPCVLEILDTAGTEQ 506
L ++F G F + TI DF IE+D L+I DTAG E+
Sbjct: 31 LLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + S F Y PT+ D + + VD + L + DTAG E R
Sbjct: 24 MLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLWDTAGQEDYNR 71
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIE-DFYRTEIEVDNSPCVLEILDTAGTEQ 506
L ++F G F + TI DF IE+D L+I DTAG E+
Sbjct: 44 LLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 89
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIE-DFYRTEIEVDNSPCVLEILDTAGTEQ 506
L ++F G F + TI DF +E+D L+I DTAG E+
Sbjct: 31 LLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQER 76
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 431 IFYCGVIFLHETSRHKLHSQSTFSDPTRSQHYHFEFPHN 315
IFYC VI+LH H++HS ++ R FP N
Sbjct: 453 IFYC-VIYLHPGDYHRVHSPVDWNIIKRRHFSGHLFPQN 490
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 411 YDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
Y PT+ D + + VD S L + DTAG E R
Sbjct: 68 YIPTVFDNFSANVSVDGSVVNLGLWDTAGQEDYSR 102
>09_03_0128 + 12584166-12585320
Length = 384
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 317 YAGIQSGSA---GIGWGRKKCFDCAVCVWMFHG 406
YA + +G+A G G K+ FDCAVC+ F G
Sbjct: 121 YAELLAGAAAPNGGGGNGKRQFDCAVCLCEFDG 153
>08_02_0839 + 21693348-21694853
Length = 501
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 341 AGIGWGRKKCFDCAVCVWMF 400
A +G GRK FDCAVC+ F
Sbjct: 141 AVVGAGRKDPFDCAVCLCEF 160
>01_01_0911 -
7176355-7176372,7176502-7176756,7177352-7177615,
7177691-7177810,7177910-7178041,7178136-7178252,
7178335-7178459,7178611-7178920,7179368-7179550,
7179643-7179787,7180126-7181355,7181454-7181563,
7181768-7182037,7182130-7182963
Length = 1370
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 391 DTNCTVKALFPTPPDPSTTTLNS 323
D N + PTPP P+TTT++S
Sbjct: 493 DQNPAASSSAPTPPPPATTTMDS 515
>10_01_0006 + 74000-76441
Length = 813
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 463 ELSTSISVL*KSSIVGSYFSMKHP-DTNCTVKALFPTPPDPSTTTLNSRIIVS 308
E+ST + V+ ++ ++ M DT C V+ P PP TT+ + I++
Sbjct: 395 EMSTYLRVVESNNDPNNFTGMTTMIDTVCPVRLALPVPPKQGRTTIRNIAIIT 447
>02_05_1187 +
34820577-34820757,34820930-34820961,34832101-34832159,
34832772-34833183
Length = 227
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +1
Query: 484 WIPLAQSSRLDAGS--VYYKWARICCSI 561
WIPLA SSR + G+ + W I C+I
Sbjct: 83 WIPLADSSRFEEGAELIDVCWMEIRCNI 110
>12_02_0318 -
17457182-17462232,17462745-17462955,17463356-17463403,
17466161-17466346
Length = 1831
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 556 YNKSGPICNIQIPHRGDCSVPAVSNISKTHGELSTSISVL*KSSI 422
Y+K P I +P + D +P + +S TH E+ +S + + S+
Sbjct: 206 YSKKLPTTTIILPLKSDKILPVKNELSSTHPEILLFLSKIRQLSV 250
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 383 LHSQSTFSDPTRSQHYHFEFPHNCVL*ITLAKLPHNVLETYSQC 252
L S S +R HYH N TL L +N+ TY++C
Sbjct: 830 LCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARC 873
>02_05_0713 + 31159574-31160764
Length = 396
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 356 GRKKCFDCAVCVWMFHGE 409
G K+ FDCAVC+ F GE
Sbjct: 145 GDKEPFDCAVCLCEFDGE 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,312,809
Number of Sequences: 37544
Number of extensions: 290594
Number of successful extensions: 766
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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