Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E19
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 87 8e-18
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 81 4e-16
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 64 9e-11
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 58 6e-09
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 58 6e-09
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 58 6e-09
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 58 6e-09
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 58 6e-09
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 51 7e-07
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 50 9e-07
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 50 9e-07
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 36 0.015
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 36 0.015
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 36 0.015
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 36 0.015
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 36 0.015
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 36 0.015
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 34 0.062
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 34 0.062
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 34 0.062
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 34 0.082
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 34 0.082
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 33 0.14
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 33 0.19
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 32 0.25
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 31 0.44
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 31 0.44
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 31 0.58
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 31 0.76
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 30 1.3
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 29 3.1
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 28 5.4
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 27 7.1
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 27 7.1
U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegr... 27 9.4
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 87.0 bits (206), Expect = 8e-18
Identities = 43/63 (68%), Positives = 44/63 (69%)
Frame = +3
Query: 318 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAG 497
MREF ALTVQFVS F+EKYDPTIEDFYR EIEVD P VLEILDTAG
Sbjct: 1 MREFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLEILDTAG 60
Query: 498 TEQ 506
TEQ
Sbjct: 61 TEQ 63
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 509 ASMRDLYITNGPGFVVVYS 565
+SMRDLYI NG GFVVVYS
Sbjct: 65 SSMRDLYIKNGQGFVVVYS 83
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 81.4 bits (192), Expect = 4e-16
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +3
Query: 318 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAG 497
MRE+ ALTVQFV G F+EKYDPTIED YR ++EVD C+LEILDTAG
Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
Query: 498 TEQ 506
TEQ
Sbjct: 61 TEQ 63
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 512 SMRDLYITNGPGFVVVYS 565
+MRDLY+ NG GFV+VYS
Sbjct: 66 AMRDLYMKNGQGFVLVYS 83
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 63.7 bits (148), Expect = 9e-11
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 315 IMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTA 494
+M E+ ALT+Q + F+E+YDPTIED YR ++ +D C+L+ILDTA
Sbjct: 3 VMTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTA 62
Query: 495 GTEQ 506
G E+
Sbjct: 63 GQEE 66
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 62.5 bits (145), Expect = 2e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
ALT+Q + F+E+YDPTIED YR ++ +D C+L+ILDTAG E+
Sbjct: 18 ALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEE 63
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +3
Query: 318 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAG 497
M+E+ ALT+Q+V G F+ YD TIED YR +VD LEILDTAG
Sbjct: 1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAG 60
Query: 498 TEQ 506
TEQ
Sbjct: 61 TEQ 63
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
ALT+QF+ F++ YDPTIED Y + VD C LEILDTAG E+
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
ALT+QF+ F++ YDPTIED Y + VD C LEILDTAG E+
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
ALT+QF+ F++ YDPTIED Y + VD C LEILDTAG E+
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
ALT+QF+ F++ YDPTIED Y + VD C LEILDTAG E+
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTE 503
ALT+QF+ F+E+Y+PT D YR ++ +D C ++ILDTAG E
Sbjct: 32 ALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTAGQE 76
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
+LT+QF F++ YDPTIED Y E+D + ++++LDTAG E+
Sbjct: 32 SLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEE 77
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
+LT+QF F++ YDPTIED Y E+D + ++++LDTAG E+
Sbjct: 32 SLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEE 77
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + VD P L + DTAG E R
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDR 66
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + VD P L + DTAG E R
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDR 66
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + VD P L + DTAG E R
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDR 66
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + VD P L + DTAG E R
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDR 66
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + VD P L + DTAG E R
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDR 66
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + VD P L + DTAG E R
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDR 66
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 34.3 bits (75), Expect = 0.062
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQ 506
AL ++F F E+Y+ TIED + I + L + DTAG ++
Sbjct: 28 ALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVTDTAGQQE 73
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + + P L + DTAG E R
Sbjct: 19 LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDR 66
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + + P L + DTAG E R
Sbjct: 16 LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDR 63
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + F F + Y PT+ + Y +IEVD L + DTAG E R
Sbjct: 21 LLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + F F + Y PT+ + Y +IEVD L + DTAG E R
Sbjct: 21 LLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVL-EILDTAGT 500
A+ QF+ F+E Y PT+E+F E E++ ++ +I+D++G+
Sbjct: 37 AMVSQFLWHKFVEDYRPTVEEFNWIEYEIEEGRVLMVQIIDSSGS 81
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
L + + + F +Y PT+ D Y + P L + DTAG E R
Sbjct: 19 LLISYTTNKFPSEYVPTVFDNYAVTAMIGGEPYTLGLFDTAGQEDYDR 66
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 399 FMEKYDPTIEDFYRTEIEVDNSPCVLEILDT 491
F KY TIED + E + P L+ILDT
Sbjct: 42 FSSKYKETIEDLHSREFRIQGVPLPLDILDT 72
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + + F +Y PT+ D Y ++ +D + L + DTAG E R
Sbjct: 23 MLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDR 70
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAGTEQSPR 515
+ + + + F +Y PT+ D Y ++ +D + L + DTAG E R
Sbjct: 23 MLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDR 70
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 369 ALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDTAG 497
+L V + F++ Y T+ D + + +DN + + DTAG
Sbjct: 19 SLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAG 61
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIE-DFYRTEIEVDNSPCVLEILDTAGTEQ 506
L ++F + E Y TI DF IE+D L+I DTAG E+
Sbjct: 27 LLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 318 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRTEIEVDNSPCVLEILDT 491
+RE A+ V++++ F+ +YD T+ED Y + V ++ ++DT
Sbjct: 7 LRELHVALVGMAGSGKSAIAVKYITKRFIGEYDSTLEDNYCRQETVGGQSLMVWMMDT 64
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 372 LTVQFVSGCFMEKYDPTIE-DFYRTEIEVDNSPCVLEILDTAG 497
L ++F + E Y TI DF IE+D L+I DTAG
Sbjct: 27 LLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -2
Query: 406 SMKHPDTNCTV-KALFPTPPDPSTTT 332
S+ H ++C + LFP+PPDP++ T
Sbjct: 168 SVYHYGSDCPCYRCLFPSPPDPNSVT 193
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 411 YDPTIEDFYRTEI-EVDNSPCVLEILDTAG 497
Y+PTIED Y+ + E D + +L + DTAG
Sbjct: 200 YEPTIEDTYQVLLEEPDKAREILILHDTAG 229
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 411 YDPTIEDFYRTEI-EVDNSPCVLEILDTAG 497
Y+PTIED Y+ + E D + +L + DTAG
Sbjct: 35 YEPTIEDTYQVLLEEPDKAREILILHDTAG 64
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 411 YDPTIEDFYRTEI-EVDNSPCVLEILDTAG 497
Y+PTIED Y+ + E D + +L + DTAG
Sbjct: 200 YEPTIEDTYQVLLEEPDKAREILILHDTAG 229
>U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegrin
plus metalloprotease)family protein 4 protein.
Length = 686
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 303 NHTCETSTQRFRNVFSVCAIKMSLLC 226
NH C T T +F N VC SLLC
Sbjct: 489 NHICCTPTCQFHNSTHVCLPGDSLLC 514
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -2
Query: 409 FSMKHPD-TNCTVKALFPTPPD 347
FS+ +PD TNC +K +FP D
Sbjct: 154 FSISNPDLTNCQIKQMFPEMAD 175
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 300 HTCETSTQRFRNVFSVCAIKMSLLCWFMTHSDP 202
+TC T TQ N+FS+ + +++ L W +SDP
Sbjct: 45 NTCPTQTQCNTNLFSI-STQVNSLKWNNDYSDP 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,597,850
Number of Sequences: 27780
Number of extensions: 277585
Number of successful extensions: 780
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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