Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E18
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 245 2e-65
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 105 3e-23
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 63 2e-10
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 62 3e-10
02_01_0265 - 1754861-1755063,1755186-1755360,1755558-1755653,175... 53 1e-07
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158... 37 0.009
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 36 0.016
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 31 0.46
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 31 0.81
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 31 0.81
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 29 1.9
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 29 1.9
05_01_0292 - 2285238-2286023,2286094-2286210 29 1.9
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 29 2.5
12_02_0437 - 19084990-19087695 28 4.3
11_06_0181 + 20985960-20987825,20987904-20989169 28 5.7
11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617 28 5.7
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 28 5.7
07_03_1584 + 27907345-27907357,27907693-27908039,27908202-279083... 28 5.7
04_04_1232 - 31956286-31956463,31957822-31957880,31959343-319593... 28 5.7
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426... 27 7.5
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 27 7.5
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 27 10.0
>05_05_0348 + 24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 245 bits (599), Expect = 2e-65
Identities = 111/132 (84%), Positives = 129/132 (97%)
Frame = +2
Query: 5 REMYQMITLGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFA 184
+EMYQMITLGGDAELELVDSLDPFSEG++FSVRPP KSWKNI+NLSGGEKTLSSLALVFA
Sbjct: 1181 KEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFA 1240
Query: 185 LHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGIY 364
LH+YKPTPLYVMDEIDAALDFKNVSIV +Y+K+RTK+AQFIIISLR NMFE+++RL+GIY
Sbjct: 1241 LHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIY 1300
Query: 365 KTEDCTKSVTVD 400
KT++CTKS+T++
Sbjct: 1301 KTDNCTKSITIN 1312
>12_02_1286 - 27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 105 bits (251), Expect = 3e-23
Identities = 51/137 (37%), Positives = 90/137 (65%), Gaps = 13/137 (9%)
Frame = +2
Query: 29 LGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTP 208
LGG A L L + +PF GI ++ PP K ++++ LSGGEKT+++LAL+FA+H ++P+P
Sbjct: 1106 LGGTAYLNLENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSFRPSP 1165
Query: 209 LYVMDEIDAALDFKNVSIVANYIKERTKNA-----------QFIIISLRYNMFEVSNRLI 355
+++DE+DAALD NV+ VA +I+ ++ Q I+ISL+ + ++ + L+
Sbjct: 1166 FFILDEVDAALDNLNVAKVAGFIRSKSCQRVDEQDNGGCGFQSIVISLKDSFYDKAEALV 1225
Query: 356 GIYKTED--CTKSVTVD 400
G+Y+ + C++++T D
Sbjct: 1226 GVYRDSERCCSRTLTFD 1242
>02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNA- 298
+++ LSGG+KT+ +L L+FA+ P P Y+ DEIDAALD + + V N I+ + A
Sbjct: 942 QSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDTQYRTAVGNMIRRLSDMAD 1001
Query: 299 -QFIIISLRYNMFEVSNRLIGI-YK 367
QFI + R + +V++++ G+ YK
Sbjct: 1002 TQFIATTFRPEIVKVADKIYGVTYK 1026
>01_06_1713 - 39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 119 WK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKN 295
WK ++S LSGG+++L +L+L+ AL +KP PLY++DE+DAALD + + IK +
Sbjct: 1072 WKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPH 1131
Query: 296 AQ 301
+Q
Sbjct: 1132 SQ 1133
>02_01_0265 -
1754861-1755063,1755186-1755360,1755558-1755653,
1756110-1756256,1756343-1756511,1756661-1756812,
1756898-1756968,1757064-1757247,1757332-1757523,
1757664-1757771
Length = 498
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTK--- 292
+++ LSGG+KT+ +L L+FA+ P P Y+ DEIDAALD + + V + +
Sbjct: 383 QSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGTNAPDMIRRLA 442
Query: 293 ---NAQFIIISLRYNMFEVSNRLIGI 361
+ QFI + R + +V++++ G+
Sbjct: 443 DMADTQFIATTFRPEIAKVADKIYGV 468
>09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,
1584676-1584745,1585132-1585197,1586374-1586429,
1587992-1588078,1588819-1589139,1589827-1589946,
1590747-1590881,1591529-1591605,1591681-1591756,
1592800-1592874,1592971-1593075,1593299-1593374,
1594482-1594617,1594702-1594804,1595186-1595298,
1596907-1597111,1597173-1597301,1597403-1597517,
1597710-1597795,1599108-1599203,1599615-1599751,
1600374-1600476,1601809-1601888,1602013-1602091,
1602241-1602298,1602489-1602586,1602673-1602767,
1602861-1602918
Length = 1074
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE--RTKNAQFII 310
LSGGE++ S+L ALH P MDE D +D + I + + + T+ +Q+I
Sbjct: 990 LSGGERSFSTLCFTLALHGMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAVTQGSQWIF 1049
Query: 311 IS 316
I+
Sbjct: 1050 IT 1051
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 36.3 bits (80), Expect = 0.016
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
S+LSGG+K S+A Y+ + + ++DE +ALD ++ +V + N ++
Sbjct: 577 SSLSGGQKQRLSIARAI----YQNSSVLILDEATSALDSRSEILVKEALTNLMANHTVLV 632
Query: 311 ISLRYNMFEVSNRLIGIY--KTEDCTKS 388
I+ R M +++R++ + K + TKS
Sbjct: 633 IAHRLEMILMADRIVLLEGGKLREITKS 660
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 292
+ + NLSGGE L +A+ L KP +Y++DE A LD + + + IK K
Sbjct: 462 QEVINLSGGE--LQRVAICLCLG--KPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAK 517
Query: 293 NAQFII 310
FI+
Sbjct: 518 KTAFIV 523
>08_01_0345 +
3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 30.7 bits (66), Expect = 0.81
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGG+K +A+ A+ K P+ ++DE +ALD ++ +V + K I+I+
Sbjct: 496 LSGGQK--QRIAIARAM--LKDPPILLLDEATSALDSESEKLVQEALDGAMKGRTVILIA 551
Query: 317 LRYNMFEVSNRLI 355
R + S++++
Sbjct: 552 HRMSTIINSDKIV 564
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 30.7 bits (66), Expect = 0.81
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 280
+ + LSGGE L +AL L KP +Y++DE A LD + + A IK
Sbjct: 466 RQVPTLSGGE--LQRVALCLCLG--KPADIYLIDEPSAHLDSEQRLLAAKVIK 514
>09_06_0061 +
20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 129 IFFHDLFGGRTLNIIPSLKGSKESTNSNSASPPNVIIWYISL 4
IF + R N++ S++ S + + S +PP +++W SL
Sbjct: 177 IFTEEEVEYRVRNVLASVESSLSNASFLSGNPPEIVVWSASL 218
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 129 IFFHDLFGGRTLNIIPSLKGSKESTNSNSASPPNVIIWYISL 4
IF + R N++ S++ S + + S +PP +++W SL
Sbjct: 1274 IFTEEEVEYRVRNVLASVESSLSNASYLSGNPPEIVVWSASL 1315
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGGEK S+A VF K + + DE +ALD + + N +K + + I I+
Sbjct: 760 LSGGEKQRVSIARVF----LKEPSILLCDEATSALDSTTEASILNSLKTLSVDRTSIFIA 815
Query: 317 LR 322
R
Sbjct: 816 HR 817
>05_01_0292 - 2285238-2286023,2286094-2286210
Length = 300
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 62 SLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLS-SLALVFAL 187
++DP E II S +P NK ++ ++GG+ + ++ L FAL
Sbjct: 20 AMDPRPEAIIQSYKPANKLKDKVAIVTGGDSGIGRAVCLCFAL 62
>08_01_0344 +
3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGG+K +A+ A+ K P+ ++DE +ALD ++ +V + +++ I+I+
Sbjct: 518 LSGGQK--QRIAIARAM--LKDPPILLLDEATSALDSESEKLVQDALEKAMSGRTVILIA 573
Query: 317 LR 322
R
Sbjct: 574 HR 575
>12_02_0437 - 19084990-19087695
Length = 901
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +2
Query: 248 KNVSIVANYIKERTKNAQFI-IISLRYNMF-EVSNRLIGIYKTEDCTKSVTVDNKLPKQA 421
K+VSI ++I + N + + ++ LRY++ + N ++G++ S T NK+PK
Sbjct: 567 KHVSI--SWICNASSNFRLLRVLCLRYSLLKDFPNAIVGLFNLHYLDLSRTKVNKIPKSV 624
Query: 422 A 424
A
Sbjct: 625 A 625
>11_06_0181 + 20985960-20987825,20987904-20989169
Length = 1043
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 95 SVRPPNKSWKNISNLSGGEKTLSSLALVF 181
+ +PPNK+ NISN++ G T S+ LVF
Sbjct: 141 ATQPPNKTDSNISNVA-GSMTPSASVLVF 168
>11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617
Length = 772
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 32 GGDAELELVDSLDPF-SEGIIFSVRPPNKSWKNISNLSGGE 151
GG++ L + S+DPF EG + S + P K+ + GG+
Sbjct: 249 GGESGLPSLPSMDPFLEEGYLGSYQLPEKAAGGVGGGGGGD 289
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 134 NLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIII 313
+LSGG K L A+ + L ++DE A LD+K + V N +K+ K+ + +
Sbjct: 314 SLSGGFKR----RLALAIQLVQTPDLLLLDEPLAGLDWKARADVVNLLKDLKKDHTILAV 369
Query: 314 S 316
S
Sbjct: 370 S 370
>07_03_1584 +
27907345-27907357,27907693-27908039,27908202-27908319,
27908653-27908705,27908808-27908978,27909447-27909643,
27909729-27909807,27909954-27909992,27910202-27910321,
27910417-27910518,27910654-27910737,27910832-27911074,
27911156-27911281,27911365-27911439,27911534-27911605,
27911807-27911926,27912075-27912172,27912643-27912802,
27912867-27912980,27913029-27913121,27913122-27913319,
27913404-27913497,27914032-27914192
Length = 958
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYY 196
K ++NLSG +K+L+++ LVF L YY
Sbjct: 4 KRMTNLSG-KKSLNTVTLVFKLPYY 27
>04_04_1232 -
31956286-31956463,31957822-31957880,31959343-31959385,
31959599-31959679,31959779-31959890,31960764-31960824,
31961853-31962518
Length = 399
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LS G++ LA + A+ P++++DE ALD + V ++ I E K + ++
Sbjct: 139 LSMGQRKRLQLARLLAID----RPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFVA 194
>03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,
4262554-4262718,4262811-4263178,4263225-4263861,
4263952-4265844,4266325-4266672
Length = 1482
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGG+K ++A K + ++DE +ALD ++ V ++ ++ A I ++
Sbjct: 1375 LSGGQKQRIAIARAIV----KQARILLLDEASSALDLESERHVQEALRRASRRATAITVA 1430
Query: 317 LRYNMFEVSNRL 352
R + ++R+
Sbjct: 1431 HRLSTVRDADRI 1442
>01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 153 FSPPERFDIFFHDLFGGRTLNIIPSLKGSKESTNSNSA 40
F P E+ + FHD +G NI+ SL+ +S+ A
Sbjct: 949 FVPKEKLAVHFHDTYGQSLSNILISLQMGVSVVDSSVA 986
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K ++A K + ++DE +ALD ++ +V + + N +I
Sbjct: 1179 AQLSGGQKQRIAIARAIV----KDPKILLLDEATSALDAESERVVQDALDRVMVNRTTVI 1234
Query: 311 ISLRYNMFEVSNRLIGIYK 367
++ R + + ++ LI + K
Sbjct: 1235 VAHRLSTIQNAD-LIAVVK 1252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,749,952
Number of Sequences: 37544
Number of extensions: 310251
Number of successful extensions: 586
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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