Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E18
(553 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated p... 232 5e-61
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p... 232 5e-61
Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of... 111 1e-24
S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein. 111 1e-24
D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein. 111 1e-24
BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural mainten... 111 1e-24
AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance ... 111 1e-24
AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance ... 103 4e-22
AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance ... 103 4e-22
AK125736-1|BAC86266.1| 486|Homo sapiens Smc1l1). protein. 103 4e-22
AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein. 103 4e-22
BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance ... 77 4e-14
AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance ... 77 4e-14
AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance ... 77 4e-14
AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated p... 77 4e-14
BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance ... 71 3e-12
AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance ... 71 3e-12
AJ005015-1|CAA06289.1| 391|Homo sapiens SMC-like protein protein. 71 3e-12
AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated p... 71 3e-12
BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance ... 41 0.003
AK025769-1|BAB15236.1| 340|Homo sapiens protein ( Homo sapiens ... 41 0.003
AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein. 41 0.003
AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein. 41 0.003
BC126208-1|AAI26209.1| 1161|Homo sapiens SMC1B protein protein. 39 0.010
U46075-1|AAA86843.1| 42|Homo sapiens protein ( Human mitotic c... 39 0.013
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 32 1.2
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 32 1.2
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 32 1.2
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 32 1.2
DQ148409-1|AAZ38723.1| 599|Homo sapiens ATP-binding cassette, s... 30 4.7
BT009779-1|AAP88781.1| 599|Homo sapiens ATP-binding cassette, s... 30 4.7
BC016988-1|AAH16988.1| 345|Homo sapiens Unknown (protein for IM... 30 4.7
BC016283-1|AAH16283.1| 599|Homo sapiens ATP-binding cassette, s... 30 4.7
AB062293-1|BAB93476.1| 599|Homo sapiens ATP-binding cassette su... 30 4.7
BC011542-1|AAH11542.2| 1011|Homo sapiens DISP1 protein protein. 29 8.2
>AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated
protein-C protein.
Length = 1202
Score = 232 bits (568), Expect = 5e-61
Identities = 116/144 (80%), Positives = 128/144 (88%)
Frame = +2
Query: 5 REMYQMITLGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFA 184
+E YQM+TLGGDAELELVDSLDPFSEGI+FSVRPP KSWK I NLSGGEKTLSSLALVFA
Sbjct: 1061 KENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFA 1120
Query: 185 LHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGIY 364
LH+YKPTPLY MDEIDAALDFKNVSIVA YI E+TKNAQFIIISLR NMFE+S+RLIGIY
Sbjct: 1121 LHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIY 1180
Query: 365 KTEDCTKSVTVDNKLPKQAANETL 436
KT + TKSV V+ PK+ A++ L
Sbjct: 1181 KTYNITKSVAVN---PKEIASKGL 1201
>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
polypeptide-C protein.
Length = 1288
Score = 232 bits (568), Expect = 5e-61
Identities = 116/144 (80%), Positives = 128/144 (88%)
Frame = +2
Query: 5 REMYQMITLGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFA 184
+E YQM+TLGGDAELELVDSLDPFSEGI+FSVRPP KSWK I NLSGGEKTLSSLALVFA
Sbjct: 1147 KENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFA 1206
Query: 185 LHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGIY 364
LH+YKPTPLY MDEIDAALDFKNVSIVA YI E+TKNAQFIIISLR NMFE+S+RLIGIY
Sbjct: 1207 LHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIY 1266
Query: 365 KTEDCTKSVTVDNKLPKQAANETL 436
KT + TKSV V+ PK+ A++ L
Sbjct: 1267 KTYNITKSVAVN---PKEIASKGL 1287
>Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 111 bits (268), Expect = 1e-24
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Frame = +2
Query: 8 EMYQMITLGGDAELEL--VDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
E+Y+ ++ A+ L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+F
Sbjct: 1083 EIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLF 1142
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKER-TKNAQFIIISLRYNMFEVSNRLIG 358
A+H YKP P +V+DEIDAALD N+ VANYIKE+ T N Q I+ISL+ + + LIG
Sbjct: 1143 AIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIG 1202
Query: 359 IYKTE-DCTKSVTVDNKLPK 415
+Y + DC S + L K
Sbjct: 1203 VYPEQGDCVISKVLTFDLTK 1222
>S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein.
Length = 1233
Score = 111 bits (268), Expect = 1e-24
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Frame = +2
Query: 8 EMYQMITLGGDAELEL--VDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
E+Y+ ++ A+ L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+F
Sbjct: 1083 EIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLF 1142
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKER-TKNAQFIIISLRYNMFEVSNRLIG 358
A+H YKP P +V+DEIDAALD N+ VANYIKE+ T N Q I+ISL+ + + LIG
Sbjct: 1143 AIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIG 1202
Query: 359 IYKTE-DCTKSVTVDNKLPK 415
+Y + DC S + L K
Sbjct: 1203 VYPEQGDCVISKVLTFDLTK 1222
>D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein.
Length = 1233
Score = 111 bits (268), Expect = 1e-24
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Frame = +2
Query: 8 EMYQMITLGGDAELEL--VDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
E+Y+ ++ A+ L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+F
Sbjct: 1083 EIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLF 1142
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKER-TKNAQFIIISLRYNMFEVSNRLIG 358
A+H YKP P +V+DEIDAALD N+ VANYIKE+ T N Q I+ISL+ + + LIG
Sbjct: 1143 AIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIG 1202
Query: 359 IYKTE-DCTKSVTVDNKLPK 415
+Y + DC S + L K
Sbjct: 1203 VYPEQGDCVISKVLTFDLTK 1222
>BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural maintenance
of chromosomes 1-like 1 protein.
Length = 1233
Score = 111 bits (268), Expect = 1e-24
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Frame = +2
Query: 8 EMYQMITLGGDAELEL--VDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
E+Y+ ++ A+ L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+F
Sbjct: 1083 EIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLF 1142
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKER-TKNAQFIIISLRYNMFEVSNRLIG 358
A+H YKP P +V+DEIDAALD N+ VANYIKE+ T N Q I+ISL+ + + LIG
Sbjct: 1143 AIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIG 1202
Query: 359 IYKTE-DCTKSVTVDNKLPK 415
+Y + DC S + L K
Sbjct: 1203 VYPEQGDCVISKVLTFDLTK 1222
>AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 111 bits (268), Expect = 1e-24
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Frame = +2
Query: 8 EMYQMITLGGDAELEL--VDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
E+Y+ ++ A+ L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+F
Sbjct: 1083 EIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLF 1142
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKER-TKNAQFIIISLRYNMFEVSNRLIG 358
A+H YKP P +V+DEIDAALD N+ VANYIKE+ T N Q I+ISL+ + + LIG
Sbjct: 1143 AIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIG 1202
Query: 359 IYKTE-DCTKSVTVDNKLPK 415
+Y + DC S + L K
Sbjct: 1203 VYPEQGDCVISKVLTFDLTK 1222
>AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance of
chromosomes 1B protein.
Length = 1235
Score = 103 bits (247), Expect = 4e-22
Identities = 50/115 (43%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
Frame = +2
Query: 68 DPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDF 247
+P+ EGI ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD
Sbjct: 1101 EPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDN 1160
Query: 248 KNVSIVANYIKERTKNA-QFIIISLRYNMFEVSNRLIGIY-KTEDC--TKSVTVD 400
N+ V++YIKE+T++ Q I+ISL+ + ++ LIGIY + +DC ++ +T+D
Sbjct: 1161 TNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYDDCMFSRVLTLD 1215
>AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance of
chromosomes 1B protein.
Length = 1235
Score = 103 bits (247), Expect = 4e-22
Identities = 50/115 (43%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
Frame = +2
Query: 68 DPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDF 247
+P+ EGI ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD
Sbjct: 1101 EPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDN 1160
Query: 248 KNVSIVANYIKERTKNA-QFIIISLRYNMFEVSNRLIGIY-KTEDC--TKSVTVD 400
N+ V++YIKE+T++ Q I+ISL+ + ++ LIGIY + +DC ++ +T+D
Sbjct: 1161 TNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYDDCMFSRVLTLD 1215
>AK125736-1|BAC86266.1| 486|Homo sapiens Smc1l1). protein.
Length = 486
Score = 103 bits (247), Expect = 4e-22
Identities = 50/115 (43%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
Frame = +2
Query: 68 DPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDF 247
+P+ EGI ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD
Sbjct: 352 EPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDN 411
Query: 248 KNVSIVANYIKERTKNA-QFIIISLRYNMFEVSNRLIGIY-KTEDC--TKSVTVD 400
N+ V++YIKE+T++ Q I+ISL+ + ++ LIGIY + +DC ++ +T+D
Sbjct: 412 TNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYDDCMFSRVLTLD 466
>AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein.
Length = 1235
Score = 103 bits (247), Expect = 4e-22
Identities = 50/115 (43%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
Frame = +2
Query: 68 DPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDF 247
+P+ EGI ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD
Sbjct: 1101 EPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDN 1160
Query: 248 KNVSIVANYIKERTKNA-QFIIISLRYNMFEVSNRLIGIY-KTEDC--TKSVTVD 400
N+ V++YIKE+T++ Q I+ISL+ + ++ LIGIY + +DC ++ +T+D
Sbjct: 1161 TNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYDDCMFSRVLTLD 1215
>BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 77.0 bits (181), Expect = 4e-14
Identities = 34/92 (36%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +2
Query: 80 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 256
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 257 SIVANYIKERTKNAQFIIISLRYNMFEVSNRL 352
+ ++ ++QFI++SL+ MF +N L
Sbjct: 1125 QNIGQMLRTHFTHSQFIVVSLKEGMFNNANVL 1156
>AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 77.0 bits (181), Expect = 4e-14
Identities = 34/92 (36%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +2
Query: 80 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 256
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 257 SIVANYIKERTKNAQFIIISLRYNMFEVSNRL 352
+ ++ ++QFI++SL+ MF +N L
Sbjct: 1125 QNIGQMLRTHFTHSQFIVVSLKEGMFNNANVL 1156
>AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 77.0 bits (181), Expect = 4e-14
Identities = 34/92 (36%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +2
Query: 80 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 256
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 257 SIVANYIKERTKNAQFIIISLRYNMFEVSNRL 352
+ ++ ++QFI++SL+ MF +N L
Sbjct: 1125 QNIGQMLRTHFTHSQFIVVSLKEGMFNNANVL 1156
>AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated
protein-E protein.
Length = 1197
Score = 77.0 bits (181), Expect = 4e-14
Identities = 34/92 (36%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +2
Query: 80 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 256
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 257 SIVANYIKERTKNAQFIIISLRYNMFEVSNRL 352
+ ++ ++QFI++SL+ MF +N L
Sbjct: 1125 QNIGQMLRTHFTHSQFIVVSLKEGMFNNANVL 1156
>BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 70.9 bits (166), Expect = 3e-12
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +2
Query: 35 GDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPL 211
G V S+D F+ GI S + + LSGG+K+L +LAL+FA+ P P
Sbjct: 1080 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1139
Query: 212 YVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGI 361
Y+ DEID ALD ++ V++ I E +AQFI + R + E +++ G+
Sbjct: 1140 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 1189
>AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 70.9 bits (166), Expect = 3e-12
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +2
Query: 35 GDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPL 211
G V S+D F+ GI S + + LSGG+K+L +LAL+FA+ P P
Sbjct: 1080 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1139
Query: 212 YVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGI 361
Y+ DEID ALD ++ V++ I E +AQFI + R + E +++ G+
Sbjct: 1140 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 1189
>AJ005015-1|CAA06289.1| 391|Homo sapiens SMC-like protein protein.
Length = 391
Score = 70.9 bits (166), Expect = 3e-12
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +2
Query: 35 GDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPL 211
G V S+D F+ GI S + + LSGG+K+L +LAL+FA+ P P
Sbjct: 254 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 313
Query: 212 YVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGI 361
Y+ DEID ALD ++ V++ I E +AQFI + R + E +++ G+
Sbjct: 314 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 363
>AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated
polypeptide protein.
Length = 1217
Score = 70.9 bits (166), Expect = 3e-12
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +2
Query: 35 GDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPL 211
G V S+D F+ GI S + + LSGG+K+L +LAL+FA+ P P
Sbjct: 1080 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1139
Query: 212 YVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGI 361
Y+ DEID ALD ++ V++ I E +AQFI + R + E +++ G+
Sbjct: 1140 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 1189
>BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance of
chromosomes 6 protein.
Length = 1091
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +2
Query: 62 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 232
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 959 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 1018
Query: 233 AALDFKNVSIVANYI---KERTKNAQFIIISLRYNMFEVSNRLIGIYKTEDCTKSVT 394
+D N I + I + + QFI+++ + S++LI I + D + T
Sbjct: 1019 VYMDMVNRRIAMDLILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQT 1075
>AK025769-1|BAB15236.1| 340|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22116 fis, clone HEP18520. ).
Length = 340
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +2
Query: 62 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 232
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 208 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 267
Query: 233 AALDFKNVSIVANYI---KERTKNAQFIIISLRYNMFEVSNRLIGIYKTEDCTKSVT 394
+D N I + I + + QFI+++ + S++LI I + D + T
Sbjct: 268 VYMDMVNRRIAMDLILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQT 324
>AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein.
Length = 1091
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +2
Query: 62 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 232
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 959 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 1018
Query: 233 AALDFKNVSIVANYI---KERTKNAQFIIISLRYNMFEVSNRLIGIYKTEDCTKSVT 394
+D N I + I + + QFI+++ + S++LI I + D + T
Sbjct: 1019 VYMDMVNRRIAMDLILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQT 1075
>AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein.
Length = 1091
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +2
Query: 62 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 232
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 959 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 1018
Query: 233 AALDFKNVSIVANYI---KERTKNAQFIIISLRYNMFEVSNRLIGIYKTEDCTKSVT 394
+D N I + I + + QFI+++ + S++LI I + D + T
Sbjct: 1019 VYMDMVNRRIAMDLILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQT 1075
>BC126208-1|AAI26209.1| 1161|Homo sapiens SMC1B protein protein.
Length = 1161
Score = 39.1 bits (87), Expect = 0.010
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = +2
Query: 218 MDEIDAALDFKNVSIVANYIKERTKNA-QFIIISLRYNMFEVSNRLIGIY-KTEDC--TK 385
+D+I L N + V++YIKE+T++ Q I+ISL+ + ++ LIGIY + +DC ++
Sbjct: 1077 IDQIYKKLCRNNSAQVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYDDCMFSR 1136
Query: 386 SVTVD 400
+T+D
Sbjct: 1137 VLTLD 1141
>U46075-1|AAA86843.1| 42|Homo sapiens protein ( Human mitotic
chromosome condensation protein mRNA, partial cds. ).
Length = 42
Score = 38.7 bits (86), Expect = 0.013
Identities = 14/36 (38%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +2
Query: 116 SWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVM 220
+WK N++ LSGG+++L +L+L+ ++ KP P+Y++
Sbjct: 7 TWKENLTELSGGQRSLVALSLILSMLLLKPAPIYIL 42
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 32.3 bits (70), Expect = 1.2
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +2
Query: 140 SGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKN-----VSIVANYIKERTKNAQF 304
SGGE+++S++ + AL P V+DEI+ +D N +V KE T F
Sbjct: 992 SGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFF 1051
Query: 305 IIISLRYNM 331
I L N+
Sbjct: 1052 ITPKLLQNL 1060
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 32.3 bits (70), Expect = 1.2
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +2
Query: 140 SGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKN-----VSIVANYIKERTKNAQF 304
SGGE+++S++ + AL P V+DEI+ +D N +V KE T F
Sbjct: 992 SGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFF 1051
Query: 305 IIISLRYNM 331
I L N+
Sbjct: 1052 ITPKLLQNL 1060
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 32.3 bits (70), Expect = 1.2
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +2
Query: 140 SGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKN-----VSIVANYIKERTKNAQF 304
SGGE+++S++ + AL P V+DEI+ +D N +V KE T F
Sbjct: 992 SGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFF 1051
Query: 305 IIISLRYNM 331
I L N+
Sbjct: 1052 ITPKLLQNL 1060
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 32.3 bits (70), Expect = 1.2
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +2
Query: 140 SGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKN-----VSIVANYIKERTKNAQF 304
SGGE+++S++ + AL P V+DEI+ +D N +V KE T F
Sbjct: 1011 SGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFF 1070
Query: 305 IIISLRYNM 331
I L N+
Sbjct: 1071 ITPKLLQNL 1079
>DQ148409-1|AAZ38723.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 30.3 bits (65), Expect = 4.7
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 292
+ + LSGGE +LAL KP +Y++DE A LD + + A +K K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAK 512
Query: 293 NAQFII 310
F++
Sbjct: 513 KTAFVV 518
>BT009779-1|AAP88781.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 30.3 bits (65), Expect = 4.7
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 292
+ + LSGGE +LAL KP +Y++DE A LD + + A +K K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAK 512
Query: 293 NAQFII 310
F++
Sbjct: 513 KTAFVV 518
>BC016988-1|AAH16988.1| 345|Homo sapiens Unknown (protein for
IMAGE:4396587) protein.
Length = 345
Score = 30.3 bits (65), Expect = 4.7
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 292
+ + LSGGE +LAL KP +Y++DE A LD + + A +K K
Sbjct: 203 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAK 258
Query: 293 NAQFII 310
F++
Sbjct: 259 KTAFVV 264
>BC016283-1|AAH16283.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 30.3 bits (65), Expect = 4.7
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 292
+ + LSGGE +LAL KP +Y++DE A LD + + A +K K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAK 512
Query: 293 NAQFII 310
F++
Sbjct: 513 KTAFVV 518
>AB062293-1|BAB93476.1| 599|Homo sapiens ATP-binding cassette
sub-family E member 1 protein.
Length = 599
Score = 30.3 bits (65), Expect = 4.7
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 292
+ + LSGGE +LAL KP +Y++DE A LD + + A +K K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAK 512
Query: 293 NAQFII 310
F++
Sbjct: 513 KTAFVV 518
>BC011542-1|AAH11542.2| 1011|Homo sapiens DISP1 protein protein.
Length = 1011
Score = 29.5 bits (63), Expect = 8.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 374 PPSYKCQ*AGSILQTCCN 321
P S+ C+ GS+L+TCCN
Sbjct: 878 PSSFVCRSTGSLLKTCCN 895
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,689,835
Number of Sequences: 237096
Number of extensions: 1672126
Number of successful extensions: 2951
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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