Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E18
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 194 4e-50
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 185 2e-47
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 185 2e-47
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 97 1e-20
AF003136-11|ABD63228.1| 140|Caenorhabditis elegans High inciden... 95 2e-20
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 70 1e-12
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 70 1e-12
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 70 1e-12
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 70 1e-12
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 64 5e-11
Z69787-3|CAA93638.2| 537|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 39 0.002
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 37 0.011
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 35 0.034
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 33 0.18
AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transpor... 32 0.32
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 31 0.55
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 30 1.3
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 30 1.3
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 30 1.3
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 30 1.3
AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 30 1.3
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 2.9
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 29 2.9
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 28 3.9
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 5.1
U56963-12|AAB38128.1| 341|Caenorhabditis elegans Serpentine rec... 28 5.1
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 27 6.8
L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical p... 27 9.0
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 194 bits (473), Expect = 4e-50
Identities = 85/130 (65%), Positives = 111/130 (85%)
Frame = +2
Query: 11 MYQMITLGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALH 190
+++M+T GGDA+LE +D DPF +GI F VRP K+WK I LSGGEKTLSSLAL+FALH
Sbjct: 1236 VFKMLTDGGDAKLEYIDKDDPFRQGISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFALH 1295
Query: 191 YYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLIGIYKT 370
++PTP YVMDEIDAALD++NVSI+A Y++++T+NAQFIIISLR NMFE++NRL+GIYK
Sbjct: 1296 MFRPTPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFELANRLVGIYKV 1355
Query: 371 EDCTKSVTVD 400
+ CT++V +D
Sbjct: 1356 DGCTRNVAID 1365
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
R13G10.1 protein.
Length = 1469
Score = 185 bits (450), Expect = 2e-47
Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 5/135 (3%)
Frame = +2
Query: 11 MYQMITLGGDAELELVD---SLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
+YQ+IT GGDA L+ V+ S DPF GI FSVRP KSWK I NLSGGEKTL+SL VF
Sbjct: 1200 LYQLITNGGDASLKFVEEGKSTDPFDGGIKFSVRPAKKSWKLIENLSGGEKTLASLCFVF 1259
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK--ERTKNAQFIIISLRYNMFEVSNRLI 355
A+H+Y+PTPLYVMDEIDAALD NVS++ANYIK ERT+NAQFIIISLR MFEV NRL+
Sbjct: 1260 AMHHYRPTPLYVMDEIDAALDLNNVSLIANYIKHSERTRNAQFIIISLRNQMFEVGNRLL 1319
Query: 356 GIYKTEDCTKSVTVD 400
GIYK + T ++ VD
Sbjct: 1320 GIYKIDGKTYNIMVD 1334
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 185 bits (450), Expect = 2e-47
Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 5/135 (3%)
Frame = +2
Query: 11 MYQMITLGGDAELELVD---SLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
+YQ+IT GGDA L+ V+ S DPF GI FSVRP KSWK I NLSGGEKTL+SL VF
Sbjct: 1200 LYQLITNGGDASLKFVEEGKSTDPFDGGIKFSVRPAKKSWKLIENLSGGEKTLASLCFVF 1259
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK--ERTKNAQFIIISLRYNMFEVSNRLI 355
A+H+Y+PTPLYVMDEIDAALD NVS++ANYIK ERT+NAQFIIISLR MFEV NRL+
Sbjct: 1260 AMHHYRPTPLYVMDEIDAALDLNNVSLIANYIKHSERTRNAQFIIISLRNQMFEVGNRLL 1319
Query: 356 GIYKTEDCTKSVTVD 400
GIYK + T ++ VD
Sbjct: 1320 GIYKIDGKTYNIMVD 1334
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 96.7 bits (230), Expect = 1e-20
Identities = 52/131 (39%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Frame = +2
Query: 8 EMYQMITLGGDAELEL-VDSLD-PFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVF 181
++Y+ ++ A+ L D+++ P+ +GI ++ P K ++ + NLSGGEKT+++LAL+F
Sbjct: 1122 DIYKQLSRNTSAQAFLGADNMEEPYLDGIQYNCVAPGKRFRPMDNLSGGEKTIAALALLF 1181
Query: 182 ALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTK-NAQFIIISLRYNMFEVSNRLIG 358
A+H P P +V+DEIDAALD N+ VA+YI E + + Q I+ISL+ + ++ LIG
Sbjct: 1182 AVHGRNPAPFFVLDEIDAALDNTNIGKVASYICESAREHMQIIVISLKEEFYNKADSLIG 1241
Query: 359 IYK-TEDCTKS 388
I+ CT S
Sbjct: 1242 IFPYPAACTTS 1252
>AF003136-11|ABD63228.1| 140|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
b protein.
Length = 140
Score = 95.5 bits (227), Expect = 2e-20
Identities = 48/109 (44%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +2
Query: 68 DPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDF 247
+P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H P P +V+DEIDAALD
Sbjct: 3 EPYLDGIQYNCVAPGKRFRPMDNLSGGEKTIAALALLFAVHGRNPAPFFVLDEIDAALDN 62
Query: 248 KNVSIVANYIKERTK-NAQFIIISLRYNMFEVSNRLIGIYK-TEDCTKS 388
N+ VA+YI E + + Q I+ISL+ + ++ LIGI+ CT S
Sbjct: 63 TNIGKVASYICESAREHMQIIVISLKEEFYNKADSLIGIFPYPAACTTS 111
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/70 (42%), Positives = 49/70 (70%)
Frame = +2
Query: 125 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQF 304
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK + QF
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIKTHFHHNQF 1155
Query: 305 IIISLRYNMF 334
II+SL+ MF
Sbjct: 1156 IIVSLKQGMF 1165
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/70 (42%), Positives = 49/70 (70%)
Frame = +2
Query: 125 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQF 304
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK + QF
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIKTHFHHNQF 1155
Query: 305 IIISLRYNMF 334
II+SL+ MF
Sbjct: 1156 IIVSLKQGMF 1165
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/70 (42%), Positives = 49/70 (70%)
Frame = +2
Query: 125 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQF 304
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK + QF
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIKTHFHHNQF 1155
Query: 305 IIISLRYNMF 334
II+SL+ MF
Sbjct: 1156 IIVSLKQGMF 1165
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/70 (42%), Positives = 49/70 (70%)
Frame = +2
Query: 125 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQF 304
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK + QF
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIKTHFHHNQF 1155
Query: 305 IIISLRYNMF 334
II+SL+ MF
Sbjct: 1156 IIVSLKQGMF 1165
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 64.5 bits (150), Expect = 5e-11
Identities = 28/80 (35%), Positives = 50/80 (62%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQ 301
+ ++ LSGG+K+L +LA++F++ P P Y+ DEIDAALD ++ VA+ I+ + AQ
Sbjct: 1098 REMTQLSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDAQHRKSVADMIQSLSDQAQ 1157
Query: 302 FIIISLRYNMFEVSNRLIGI 361
F+ + R + + + G+
Sbjct: 1158 FVTTTFRPELLATAEKFYGV 1177
>Z69787-3|CAA93638.2| 537|Caenorhabditis elegans Hypothetical
protein C44C10.4 protein.
Length = 537
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +2
Query: 143 GGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLR 322
GG + + LAL+FA+H +KP+PL V+D+ID L + + Y+ R K QFI+ +
Sbjct: 464 GGSRMIVDLALIFAIHEWKPSPLVVIDDIDRNLYHEASKKIEPYL-SRQKQTQFIVTTKE 522
Query: 323 YNMF 334
+ F
Sbjct: 523 DSYF 526
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical protein
F54D5.14 protein.
Length = 1130
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 113 KSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 283
K +++ LSGGE++ + ALV +L P +MDE D +D N +V + + E
Sbjct: 1036 KRVRDLKGLSGGERSFVTAALVMSLWEVMEQPFRMMDEFDVFMDMMNRKLVMDLLVE 1092
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 113 KSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 283
K +++ LSGGE++ + ALV +L P +MDE D +D N +V + + E
Sbjct: 1036 KRVRDLKGLSGGERSFVTAALVMSLWEVMEQPFRMMDEFDVFMDMMNRKLVMDLLVE 1092
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical protein
C23H4.6 protein.
Length = 1137
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 125 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 283
++ LSGGE++ + ALV +L P ++DE D +D N +V + + E
Sbjct: 1047 DLKGLSGGERSFVTAALVMSLWEVMEQPFRMLDEFDVFMDMMNRKLVMDLLVE 1099
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical protein
C27A2.1 protein.
Length = 1076
Score = 35.1 bits (77), Expect = 0.034
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +2
Query: 8 EMYQMITLGGDAELELVDS-LDPFSEGIIFSVR-PPNKSWKNISNL--SGGEKTLSSLAL 175
+ + + G+ LE+ ++ LD GI+ V +S K + N SGGE++++++
Sbjct: 916 QFFDSLGCRGEVSLEVPENPLDIEKYGIMIMVCFRKGESMKRLDNKVQSGGERSVATMLY 975
Query: 176 VFALHYYKPTPLYVMDEIDAALDFKN 253
+ AL P P +DEI+ +D N
Sbjct: 976 LLALQQLCPVPFRCIDEINQGMDPTN 1001
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 32.7 bits (71), Expect = 0.18
Identities = 25/98 (25%), Positives = 49/98 (50%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K +A+ A+ K P+ ++DE +ALD + +V + K +I
Sbjct: 563 AQLSGGQK--QRIAIARAI--LKNPPILILDEATSALDSHSEHMVQEALNNVMKGRTVLI 618
Query: 311 ISLRYNMFEVSNRLIGIYKTEDCTKSVTVDNKLPKQAA 424
I+ R + S ++I + K + +S T + + K+ +
Sbjct: 619 IAHRLSTIR-SAQMIYVIKDKKALESGTHEQLMAKKGS 655
>AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform a protein.
Length = 815
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
S +SGG+K +A+ AL +P L ++DE +ALD ++ V I + K I+
Sbjct: 660 SQMSGGQK--QRIAIARAL-VRQPVVL-LLDEATSALDAESEHTVQEAISKNLKGKTVIL 715
Query: 311 ISLRYNMFEVSNRLIGIYK 367
I+ R + E +++++ I K
Sbjct: 716 IAHRLSTVENADKIVVINK 734
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 31.1 bits (67), Expect = 0.55
Identities = 20/77 (25%), Positives = 41/77 (53%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
+SGG+K +A+ AL + + ++DE +ALD ++ ++V + + II++
Sbjct: 653 MSGGQK--QRIAIARAL--VRNPAVLILDEATSALDTESEALVQQALSRCAQERTVIIVA 708
Query: 317 LRYNMFEVSNRLIGIYK 367
R + E +N++ I K
Sbjct: 709 HRLSTIEKANKIAVIVK 725
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/73 (26%), Positives = 42/73 (57%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
+SGG+K +A+ AL + + ++DE +ALD ++ SIV + ++ ++ I+I+
Sbjct: 522 MSGGQK--QRIAIARAL--VRNPKILLLDEATSALDAESESIVQSALENASRGRTTIVIA 577
Query: 317 LRYNMFEVSNRLI 355
R + ++++I
Sbjct: 578 HRLSTVRNADKII 590
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/73 (26%), Positives = 42/73 (57%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
+SGG+K +A+ AL + + ++DE +ALD ++ SIV + ++ ++ I+I+
Sbjct: 522 MSGGQK--QRIAIARAL--VRNPKILLLDEATSALDAESESIVQSALENASRGRTTIVIA 577
Query: 317 LRYNMFEVSNRLI 355
R + ++++I
Sbjct: 578 HRLSTVRNADKII 590
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGG+K ++A + + ++DE +ALD ++ SIV + + +K I+I+
Sbjct: 568 LSGGQKQRVAIARTLI----RDPKVLLLDEATSALDAQSESIVQSALNNASKGRTTIMIA 623
Query: 317 LRYNMFEVSNRLI 355
R + +++++
Sbjct: 624 HRLSTIREADKIV 636
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical protein
DH11.3 protein.
Length = 1270
Score = 29.9 bits (64), Expect = 1.3
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
++LSGG+K +A+ A+ KP L ++DE +ALD ++ IV ++ T II
Sbjct: 1167 ASLSGGQK--QRIAIARAI-IRKPKIL-LLDEATSALDTQSEEIVQKALRSATTGRTSII 1222
Query: 311 ISLRYN-------MFEVSNRLIGIYKTEDCTKSVTVDNKLPKQAANETLT 439
++ R + ++ +S + Y T + V +D+K + A ++L+
Sbjct: 1223 VAHRLSTVQHCDTIYYISRGAVAEYGTH--AELVAMDSKYARLVAAQSLS 1270
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGG+K ++A + + ++DE +ALD ++ SIV + + +K I+I+
Sbjct: 568 LSGGQKQRVAIARTLI----RDPKVLLLDEATSALDAQSESIVQSALNNASKGRTTIMIA 623
Query: 317 LRYNMFEVSNRLI 355
R + +++++
Sbjct: 624 HRLSTIREADKIV 636
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 122 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQ 301
+N+ LSGGE +LAL K LY++DE A LD + A IK +A+
Sbjct: 467 RNVKELSGGELQRVALALCLG----KTASLYLIDEPSAYLDSEQRLHAAKVIKRFIMHAK 522
>AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter
(pgp related)protein 4 protein.
Length = 787
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/79 (25%), Positives = 42/79 (53%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ +SGG+K +A+ AL + + ++DE +ALD ++ +V I + I+
Sbjct: 634 TQMSGGQK--QRIAIARAL--VREPAILLLDEATSALDTESEHLVQEAIYKNLDGKSVIL 689
Query: 311 ISLRYNMFEVSNRLIGIYK 367
I+ R + E +++++ I K
Sbjct: 690 IAHRLSTVEKADKIVVINK 708
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical
protein F22E10.2 protein.
Length = 1324
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/73 (23%), Positives = 39/73 (53%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGG+K ++A + + ++DE +ALD ++ S+V + + +K I+I+
Sbjct: 556 LSGGQKQRVAIARTLI----RDPKVLLLDEATSALDAQSESVVQSALNNASKGRTTIMIA 611
Query: 317 LRYNMFEVSNRLI 355
R + +++++
Sbjct: 612 HRLSTIREADKIV 624
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/81 (20%), Positives = 42/81 (51%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K ++A + + ++DE +ALD ++ +V ++ ++ I+
Sbjct: 459 TQLSGGQKQRIAIARTLV----RNPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 514
Query: 311 ISLRYNMFEVSNRLIGIYKTE 373
++ R + ++++I + K E
Sbjct: 515 VAHRLSTIRNASKIIVMQKGE 535
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/81 (20%), Positives = 42/81 (51%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K ++A + + ++DE +ALD ++ +V ++ ++ I+
Sbjct: 518 TQLSGGQKQRIAIARTLV----RNPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 311 ISLRYNMFEVSNRLIGIYKTE 373
++ R + ++++I + K E
Sbjct: 574 VAHRLSTIRNASKIIVMQKGE 594
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/81 (20%), Positives = 42/81 (51%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K ++A + + ++DE +ALD ++ +V ++ ++ I+
Sbjct: 518 TQLSGGQKQRIAIARTLV----RNPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 311 ISLRYNMFEVSNRLIGIYKTE 373
++ R + ++++I + K E
Sbjct: 574 VAHRLSTIRNASKIIVMQKGE 594
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +2
Query: 137 LSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIIS 316
LSGG+K ++A + + ++DE +ALD ++ S+V + + K I+I+
Sbjct: 556 LSGGQKQRVAIARTLI----RDPKVLLLDEATSALDAQSESVVQSALNNAAKGRTTIMIA 611
Query: 317 LRYNMFEVSNRLI 355
R + +++++
Sbjct: 612 HRLSTIREADKIV 624
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K +A+ AL + + ++DE +ALD ++ IV + + K II
Sbjct: 553 TQLSGGQK--QRIAIARAL--VRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTII 608
Query: 311 ISLRYNMFEVSNRLI 355
I+ R + ++ +I
Sbjct: 609 IAHRLSTIRNADLII 623
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/81 (23%), Positives = 42/81 (51%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K ++A + + ++DE +ALD ++ IV +++ + I+
Sbjct: 542 AQLSGGQKQRIAIARTLV----RNPRILLLDEATSALDNESEFIVQEALQKASIGRTTIV 597
Query: 311 ISLRYNMFEVSNRLIGIYKTE 373
++ R + +N++I + K E
Sbjct: 598 VAHRLSTIRNANKIIVMEKGE 618
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K +A+ AL + + ++DE +ALD ++ IV + + K II
Sbjct: 553 TQLSGGQK--QRIAIARAL--VRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTII 608
Query: 311 ISLRYNMFEVSNRLI 355
I+ R + ++ +I
Sbjct: 609 IAHRLSTIRNADLII 623
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 203 TPLY-VMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLI 355
TPL V+DEID + KN ++ A + T + + II+ + N +++ RL+
Sbjct: 267 TPLVLVLDEIDHLANRKNAALYAAFQWPETLSRKIIILGIA-NSIDLTERLL 317
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K +A+ A+ + L ++DE +ALD ++ IV N + ++ I+
Sbjct: 1140 AQLSGGQK--QRIAITRAI--LRNPKLLLLDEATSALDTESEKIVQNALDTASERLSTIV 1195
Query: 311 ISLR 322
++ R
Sbjct: 1196 VAHR 1199
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K ++A V K + ++DE +ALD + V +K+ ++ II
Sbjct: 517 AQLSGGQKQRIAIARVLV----KNPAILLLDEATSALDSASERAVQLALKKASEGRTTII 572
Query: 311 ISLRYNMFEVSNRLI 355
I+ R + ++++
Sbjct: 573 IAHRLSTIRHCDKIM 587
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K +A+ A+ + L ++DE +ALD ++ IV N + ++ I+
Sbjct: 1140 AQLSGGQK--QRIAITRAI--LRNPKLLLLDEATSALDTESEKIVQNALDTASERLSTIV 1195
Query: 311 ISLR 322
++ R
Sbjct: 1196 VAHR 1199
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 131 SNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFII 310
+ LSGG+K ++A V K + ++DE +ALD + V +K+ ++ II
Sbjct: 517 AQLSGGQKQRIAIARVLV----KNPAILLLDEATSALDSASERAVQLALKKASEGRTTII 572
Query: 311 ISLRYNMFEVSNRLI 355
I+ R + ++++
Sbjct: 573 IAHRLSTIRHCDKIM 587
>U56963-12|AAB38128.1| 341|Caenorhabditis elegans Serpentine
receptor, class v protein33 protein.
Length = 341
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 499 FFIVQSS*YNNIHIFIL*TLCERLVCSLLRQFVIYCDGLGAVLRLINANE 350
F+I +S YN+I+ F+ + SL R FVI C L ++ NA++
Sbjct: 91 FYIAAAS-YNSIYYFLYIRCTGIIFLSLQRYFVICCPMLQFTYKIQNASK 139
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 534 ELVPAPPRF--FCFFL*FNQVNIIISTYLYYKHYVSVSFAACFGSLLSTV 391
EL P P R + F +N+V +++S +++Y ++ CF L S +
Sbjct: 450 ELFPTPIRTIGYAFLQLWNRVGVVLSPFIFYLADYWLALPFCFMILFSLI 499
>L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical
protein C06E1.11 protein.
Length = 371
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 123 KIYQISPEVKKPYHH 167
++YQ+ EVKK YHH
Sbjct: 65 EMYQVGKEVKKDYHH 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,553,443
Number of Sequences: 27780
Number of extensions: 277697
Number of successful extensions: 673
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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