Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_E16
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.                  37   0.058
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  37   0.058
M92432-1|AAA60547.1| 1103|Homo sapiens guanylyl cyclase protein.       33   0.54 
AJ222657-1|CAA10914.1| 1103|Homo sapiens guanylyl cyclase protein.     33   0.54 
BC018098-1|AAH18098.1|  345|Homo sapiens PHTF2 protein protein.        32   1.6  
AF000561-1|AAB58414.1|  590|Homo sapiens TTF-I interacting pepti...    29   8.8  

>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
          Length = 1270

 Score = 36.7 bits (81), Expect = 0.058
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
 Frame = +2

Query: 14  ICTSESEFGNAYSLARSCPKVQT-PEHSHHQMHAALPPACEQVFGGISPLRPISLLLDIT 190
           + +SE +FGN++  A +CP V T PE      H       +      S        +D  
Sbjct: 385 VVSSELDFGNSWKEAPTCPDVSTNPEPCSLNPHRRSWAEKQCSILKSSVFSICHSKVDPK 444

Query: 191 PFRQACIHAVSGTDAAKDLHQACDLARGYA 280
           PF +AC+H     D   D    C     YA
Sbjct: 445 PFYEACVHDSCSCDTGGDCECFCSAVASYA 474


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 36.7 bits (81), Expect = 0.058
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
 Frame = +2

Query: 14   ICTSESEFGNAYSLARSCPKVQT-PEHSHHQMHAALPPACEQVFGGISPLRPISLLLDIT 190
            + +SE +FGN++  A +CP V T PE      H       +      S        +D  
Sbjct: 1010 VVSSELDFGNSWKEAPTCPDVSTNPEPCSLNPHRRSWAEKQCSILKSSVFSICHSKVDPK 1069

Query: 191  PFRQACIHAVSGTDAAKDLHQACDLARGYA 280
            PF +AC+H     D   D    C     YA
Sbjct: 1070 PFYEACVHDSCSCDTGGDCECFCSAVASYA 1099


>M92432-1|AAA60547.1| 1103|Homo sapiens guanylyl cyclase protein.
          Length = 1103

 Score = 33.5 bits (73), Expect = 0.54
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 330 TQASGSTAGSSPVRASAAYPLARSQAWCKSLAASVPDTAWMHA 202
           TQA G+TA +    A A Y L R+  W +    + P   W+ A
Sbjct: 155 TQAEGTTAPAVTPAADALYALLRAFGWARVALVTAPQDLWVEA 197


>AJ222657-1|CAA10914.1| 1103|Homo sapiens guanylyl cyclase protein.
          Length = 1103

 Score = 33.5 bits (73), Expect = 0.54
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 330 TQASGSTAGSSPVRASAAYPLARSQAWCKSLAASVPDTAWMHA 202
           TQA G+TA +    A A Y L R+  W +    + P   W+ A
Sbjct: 155 TQAEGTTAPAVTPAADALYALLRAFGWARVALVTAPQDLWVEA 197


>BC018098-1|AAH18098.1|  345|Homo sapiens PHTF2 protein protein.
          Length = 345

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +2

Query: 17  CTSESEFGNAYSLARSCPKVQTPEHSHHQMHAALPPACEQVFGGISPLRPISLLLDITPF 196
           CTSE++  N       C K +  +   HQ+++ +P    Q+FG       +SL+L +TPF
Sbjct: 224 CTSETDVENHQ--INPCVKKEYRDDPFHQVNSHIPGIGYQIFG-----NAVSLILGLTPF 276


>AF000561-1|AAB58414.1|  590|Homo sapiens TTF-I interacting peptide
           21 protein.
          Length = 590

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 59  RSCPKVQTPEHSHHQMHAALPPACEQVFGGISPLRP 166
           R CP+++ PE  H + H   P    Q+   + PLRP
Sbjct: 498 RLCPQLR-PEEPHARAHGPAPLPVRQLLQDLRPLRP 532


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,812,720
Number of Sequences: 237096
Number of extensions: 1889227
Number of successful extensions: 4614
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4601
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)