Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E15
(371 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008030-1|AAH08030.1| 362|Homo sapiens PPP1R12C protein protein. 34 0.17
AL137618-1|CAB70844.1| 479|Homo sapiens hypothetical protein pr... 34 0.17
AK027086-1|BAB15651.1| 602|Homo sapiens protein ( Homo sapiens ... 34 0.17
AF312028-1|AAG60045.1| 782|Homo sapiens myosin binding subunit ... 34 0.17
AB209452-1|BAD92689.1| 736|Homo sapiens protein phosphatase 1, ... 34 0.17
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 32 0.68
AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alph... 32 0.68
AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen prot... 32 0.68
AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-l... 31 1.6
AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein. 31 1.6
AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin l... 31 1.6
AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein. 31 1.6
AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein p... 30 2.7
AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein p... 30 2.7
AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein p... 30 2.7
AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein p... 30 2.7
AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein p... 30 2.7
AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A... 30 2.7
AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein. 29 3.6
AB011088-1|BAA25442.3| 1382|Homo sapiens KIAA0516 protein protein. 29 4.8
X59131-1|CAA41848.1| 1092|Homo sapiens hypothetical protein prot... 29 6.3
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 29 6.3
BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein. 29 6.3
BC038103-1|AAH38103.1| 1092|Homo sapiens ubiquitin specific pept... 29 6.3
BC036027-1|AAH36027.1| 1092|Homo sapiens ubiquitin specific pept... 29 6.3
BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein. 29 6.3
AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein. 29 6.3
AL138681-1|CAH70264.1| 1092|Homo sapiens ubiquitin specific pept... 29 6.3
AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant... 29 6.3
AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear fact... 29 6.3
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 28 8.4
>BC008030-1|AAH08030.1| 362|Homo sapiens PPP1R12C protein protein.
Length = 362
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 38 RCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 211
R R T +P L P P + PPPCL ++ +R E PA P P A T P
Sbjct: 48 RLARITPTPSPKL-PEPSVLSEVTKPPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 103
>AL137618-1|CAB70844.1| 479|Homo sapiens hypothetical protein
protein.
Length = 479
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 38 RCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 211
R R T +P L P P + PPPCL ++ +R E PA P P A T P
Sbjct: 164 RLARITPTPSPKL-PEPSVLSEVTKPPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 219
>AK027086-1|BAB15651.1| 602|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23433 fis, clone HRC12009. ).
Length = 602
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 38 RCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 211
R R T +P L P P + PPPCL ++ +R E PA P P A T P
Sbjct: 288 RLARITPTPSPKL-PEPSVLSEVTKPPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 343
>AF312028-1|AAG60045.1| 782|Homo sapiens myosin binding subunit 85
protein.
Length = 782
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 38 RCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 211
R R T +P L P P + PPPCL ++ +R E PA P P A T P
Sbjct: 467 RLARITPTPSPKL-PEPSVLSEVTKPPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 522
>AB209452-1|BAD92689.1| 736|Homo sapiens protein phosphatase 1,
regulatory subunit 12C variant protein.
Length = 736
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 38 RCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 211
R R T +P L P P + PPPCL ++ +R E PA P P A T P
Sbjct: 422 RLARITPTPSPKL-PEPSVLSEVTKPPPCLENSSP-PSRIPEPESPAKPNVPTASTAP 477
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 31.9 bits (69), Expect = 0.68
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 17 HEENAGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARA-AEERLPAGPIAP 193
H E S +++ ALK P +L PPP ++R T ++ A + P GP P
Sbjct: 125 HRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGP 184
Query: 194 VAPTVPVG 217
P+ P+G
Sbjct: 185 PGPSGPLG 192
>AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alpha 1
protein.
Length = 717
Score = 31.9 bits (69), Expect = 0.68
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 17 HEENAGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARA-AEERLPAGPIAP 193
H E S +++ ALK P +L PPP ++R T ++ A + P GP P
Sbjct: 218 HRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGP 277
Query: 194 VAPTVPVG 217
P+ P+G
Sbjct: 278 PGPSGPLG 285
>AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen
protein.
Length = 717
Score = 31.9 bits (69), Expect = 0.68
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 17 HEENAGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARA-AEERLPAGPIAP 193
H E S +++ ALK P +L PPP ++R T ++ A + P GP P
Sbjct: 218 HRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGP 277
Query: 194 VAPTVPVG 217
P+ P+G
Sbjct: 278 PGPSGPLG 285
>AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-like
cytoplasmic protein protein.
Length = 2517
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 184 WPR-RQPFLRRTCLYMSRTAQAWRRN 110
WP R+ RRTCL+ + AQAW R+
Sbjct: 1303 WPLFREQLCRRTCLFYTIRAQAWSRD 1328
>AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.
Length = 2518
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 184 WPR-RQPFLRRTCLYMSRTAQAWRRN 110
WP R+ RRTCL+ + AQAW R+
Sbjct: 1303 WPLFREQLCRRTCLFYTIRAQAWSRD 1328
>AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin ligase
protein.
Length = 2517
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 184 WPR-RQPFLRRTCLYMSRTAQAWRRN 110
WP R+ RRTCL+ + AQAW R+
Sbjct: 1303 WPLFREQLCRRTCLFYTIRAQAWSRD 1328
>AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.
Length = 1753
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 184 WPR-RQPFLRRTCLYMSRTAQAWRRN 110
WP R+ RRTCL+ + AQAW R+
Sbjct: 539 WPLFREQLCRRTCLFYTIRAQAWSRD 564
>AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 AGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVA--- 199
AG C A+RA P P + L+ R HV+A AA LPA AP A
Sbjct: 48 AGPGCPIPLASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAPAAAPHATCR 107
Query: 200 -PTVPVG 217
P+ P G
Sbjct: 108 GPSAPRG 114
>AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 AGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVA--- 199
AG C A+RA P P + L+ R HV+A AA LPA AP A
Sbjct: 48 AGPGCPIPLASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAPAAAPHATCR 107
Query: 200 -PTVPVG 217
P+ P G
Sbjct: 108 GPSAPRG 114
>AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 AGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVA--- 199
AG C A+RA P P + L+ R HV+A AA LPA AP A
Sbjct: 48 AGPGCPIPLASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAPAAAPHATCR 107
Query: 200 -PTVPVG 217
P+ P G
Sbjct: 108 GPSAPRG 114
>AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 AGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVA--- 199
AG C A+RA P P + L+ R HV+A AA LPA AP A
Sbjct: 48 AGPGCPIPLASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAPAAAPHATCR 107
Query: 200 -PTVPVG 217
P+ P G
Sbjct: 108 GPSAPRG 114
>AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 AGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVA--- 199
AG C A+RA P P + L+ R HV+A AA LPA AP A
Sbjct: 48 AGPGCPIPLASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAPAAAPHATCR 107
Query: 200 -PTVPVG 217
P+ P G
Sbjct: 108 GPSAPRG 114
>AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A2LP
protein.
Length = 1051
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 AGSRCLRTTAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVA--- 199
AG C A+RA P P + L+ R HV+A AA LPA AP A
Sbjct: 48 AGPGCPIPLASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAPAAAPHATCR 107
Query: 200 -PTVPVG 217
P+ P G
Sbjct: 108 GPSAPRG 114
>AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein.
Length = 1053
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 128 RRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKE 256
+RA+ +A + GP P PTVP M P+ SH +E
Sbjct: 14 QRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEE 56
>AB011088-1|BAA25442.3| 1382|Homo sapiens KIAA0516 protein protein.
Length = 1382
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 59 ARAPALKP*PERIGT---QLIPPPCLRR 133
ARAPAL P P R+G+ +PP C RR
Sbjct: 24 ARAPALVPVPARVGSVPCGQVPPLCRRR 51
>X59131-1|CAA41848.1| 1092|Homo sapiens hypothetical protein
protein.
Length = 1092
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 128 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 265
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 170 LPAGPIAPVAPTVPVG 217
LP+GP+AP AP P+G
Sbjct: 59 LPSGPLAPPAPAAPLG 74
>BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 170 LPAGPIAPVAPTVPVG 217
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>BC038103-1|AAH38103.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 128 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 265
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>BC036027-1|AAH36027.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 128 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 265
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 170 LPAGPIAPVAPTVPVG 217
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein.
Length = 538
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/58 (36%), Positives = 22/58 (37%)
Frame = +2
Query: 86 PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEA 259
P R T PP R A A AA PA P P AP P A+ AA A
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPP-PPPAPVAAAAPARAPRAAAAAATA 158
>AL138681-1|CAH70264.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 128 RRATHVKARAAEERLPAGPIA--PVAPTVPVGMGNHPEASHAAKEALK 265
++A+HV +A + PI+ P P G HP A HAA E L+
Sbjct: 806 QKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHA-HAASEVLE 852
>AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant
protein.
Length = 350
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 170 LPAGPIAPVAPTVPVG 217
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear
factor-3 gamma protein.
Length = 350
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 170 LPAGPIAPVAPTVPVG 217
LP+GP+AP AP P+G
Sbjct: 60 LPSGPLAPPAPAAPLG 75
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 35 SRCLRTTAA-RAPALKP*PERIGTQLIPPPCLRRATHVK-ARAAEERLPAGPIAPVAPTV 208
S LR+ A + PA + P +GT P L RAT A A + P PI PVA V
Sbjct: 2482 SAALRSLPAEKPPAPEAQPTSVGTGPPAKPVLLRATPKPLAPAPLAKAPRLPIKPVAAPV 2541
Query: 209 PVGMGNHPEASHAAKEALK 265
PE + + E ++
Sbjct: 2542 LAQDQASPETTSPSPELVR 2560
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,773,583
Number of Sequences: 237096
Number of extensions: 839003
Number of successful extensions: 2966
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2963
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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